RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Grid2Q61625 1007 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Zfyve1Q810J8 777 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Adnp2Q8CHC8 1165 aaKnown RBP9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Fam83aQ8K2P2 436 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Mup18A2BIM8 181 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gm3542K7N6U2 270 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gm8281L7N235 204 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Mup11P04938 181 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Cd2P08920 344 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Atoh1P48985 351 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 BckdhaP50136 442 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Fbxo40P62932 710 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Bmp1P98063 991 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Tigd2Q0VBL1 525 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Klhdc9Q3USL1 350 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gm21320Q4FZE8 181 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Ppp2r2bQ6ZWR4 443 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Pp2d1Q8BVT6 620 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 PdgfcQ8CI19 345 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gsto2Q8K2Q2 248 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Onecut3Q8K557 490 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Olfr1311Q8VET0 312 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Yaf2Q99LW6 179 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 DlstQ9D2G2 454 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Sult1c2Q9D939 296 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 9530002B09RikQ9EPV7 135 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Hacl1Q9QXE0 581 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gm14147A2AQX6 640 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Sac3d1A6H687 427 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gm3594E9Q2A7 267 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Slc22a1O08966 556 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Psmb10O35955 273 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Klf10O89091 479 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Pgk1P09411 417 aaKnown RBP9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Hnf4aP49698 474 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 CntfP51642 198 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 KapP61110 121 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 CcnjQ3TZI6 379 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Arhgap1Q5FWK3 439 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Chpt1Q8C025 398 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Slc9a8Q8R4D1 576 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Spg21Q9CQC8 308 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gpn3Q9D3W4 284 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Ndst3Q9EQH7 873 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Smarcb1Q9Z0H3 385 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Clic1Q9Z1Q5 241 aaKnown RBP9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Prdm14E9Q3T6 561 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Nsg2P47759 171 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 AcadvlP50544 656 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Tfap2cQ61312 449 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Six1Q62231 284 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Scara5Q8K299 491 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Kdelr3Q8R1L4 214 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Olfr697Q8VFM4 317 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Ccdc86Q9JJ89 426 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Fam217bA2AJW5 387 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Vmn2r14E9Q759 848 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Olfr172E9Q8F6 309 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gm29394H3BIW7 199 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Rplp0P14869 317 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Pxmp2P42925 194 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Bcl2a1Q07440 172 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Hsd3b5Q61694 373 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Ppp3r1Q63810 170 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Cand1Q6ZQ38 1230 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Acsl6Q91WC3 697 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Isl2Q9CXV0 359 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 GnmtQ9QXF8 293 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 DctP29812 517 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Rab8aP55258 207 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Ap2m1P84091 435 aaKnown RBP9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 SelpQ01102 768 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Cdh12Q5RJH3 794 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Rab39aQ8BHD0 217 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gemin8Q8BHE1 238 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Slco6c1Q8C0X7 706 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Ddx52Q8K301 598 aaKnown RBP9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Micu1Q8VCX5 477 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Ca9Q8VHB5 437 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Olfr706Q9EPF8 316 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Tnfsf13bQ9WU72 309 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gm17190V9GX38 357 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Ube2ql1A0PJN4 161 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 9330159F19RikD3Z623 648 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Fv4P11370 679 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Rhox5P52651 210 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 FhP97807 507 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Armc5Q5EBP3 926 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Olfr684Q7TRN8 312 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Pcdh19Q80TF3 1145 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Fate1Q8CEK7 99 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gabra4Q9D6F4 552 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gbe1Q9D6Y9 702 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 1700034I23RikQ9D9Q3 184 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 P33monoxQ9DBN4 303 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 NckipsdQ9ESJ4 714 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Ccr10Q9JL21 362 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Tyk2Q9R117 1184 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gm16494E9Q2Z4 87 aa9.95□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gdf3Q07104 366 aa9.95□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms