Protein–RNA interactions for Protein: P09411

Pgk1, Phosphoglycerate kinase 1, mousemouse

Known RBP Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pgk1P09411 Gm25239-201ENSMUST00000174915 86 ntBASIC42.01■■■■■ 4.32
Pgk1P09411 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39■■■■□ 3.83
Pgk1P09411 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.4■■■■□ 3.74
Pgk1P09411 Gm24109-201ENSMUST00000175489 103 ntBASIC36.54■■■■□ 3.44
Pgk1P09411 Gm15042-201ENSMUST00000120212 883 ntBASIC36.42■■■■□ 3.42
Pgk1P09411 Gm15045-201ENSMUST00000117359 883 ntBASIC35.55■■■■□ 3.28
Pgk1P09411 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.48■■■■□ 3.27
Pgk1P09411 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
Pgk1P09411 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
Pgk1P09411 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Pgk1P09411 Gm23366-201ENSMUST00000175022 89 ntBASIC35.04■■■■□ 3.2
Pgk1P09411 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Pgk1P09411 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.22■■■■□ 3.07
Pgk1P09411 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Pgk1P09411 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
Pgk1P09411 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34■■■■□ 3.03
Pgk1P09411 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.92■■■■□ 3.02
Pgk1P09411 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.87■■■■□ 3.01
Pgk1P09411 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Pgk1P09411 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.69■■■□□ 2.98
Pgk1P09411 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Pgk1P09411 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Pgk1P09411 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Pgk1P09411 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.26■■■□□ 2.91
Pgk1P09411 Gm25238-201ENSMUST00000174914 89 ntBASIC33.26■■■□□ 2.91
Pgk1P09411 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.25■■■□□ 2.91
Pgk1P09411 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Pgk1P09411 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.01■■■□□ 2.87
Pgk1P09411 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Pgk1P09411 Psd-208ENSMUST00000224556 2034 ntBASIC32.85■■■□□ 2.85
Pgk1P09411 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Pgk1P09411 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.72■■■□□ 2.83
Pgk1P09411 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
Pgk1P09411 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.55■■■□□ 2.8
Pgk1P09411 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Pgk1P09411 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.39■■■□□ 2.78
Pgk1P09411 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.23■■■□□ 2.75
Pgk1P09411 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.22■■■□□ 2.75
Pgk1P09411 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Pgk1P09411 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Pgk1P09411 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
Pgk1P09411 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.12■■■□□ 2.73
Pgk1P09411 Gm25262-201ENSMUST00000174934 133 ntBASIC32■■■□□ 2.71
Pgk1P09411 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
Pgk1P09411 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.88■■■□□ 2.69
Pgk1P09411 Gm27325-201ENSMUST00000175467 74 ntBASIC31.85■■■□□ 2.69
Pgk1P09411 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Pgk1P09411 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.68■■■□□ 2.66
Pgk1P09411 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
Pgk1P09411 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Pgk1P09411 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Pgk1P09411 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.48■■■□□ 2.63
Pgk1P09411 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Pgk1P09411 Rab21-202ENSMUST00000218831 843 ntBASIC31.47■■■□□ 2.63
Pgk1P09411 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Pgk1P09411 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Pgk1P09411 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.44■■■□□ 2.62
Pgk1P09411 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.42■■■□□ 2.62
Pgk1P09411 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
Pgk1P09411 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Pgk1P09411 Gm26115-201ENSMUST00000175605 87 ntBASIC31.33■■■□□ 2.61
Pgk1P09411 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Pgk1P09411 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Pgk1P09411 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.21■■■□□ 2.59
Pgk1P09411 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.16■■■□□ 2.58
Pgk1P09411 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Pgk1P09411 Gm8109-201ENSMUST00000194076 746 ntBASIC31.14■■■□□ 2.58
Pgk1P09411 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Pgk1P09411 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Pgk1P09411 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.08■■■□□ 2.57
Pgk1P09411 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
Pgk1P09411 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.06■■■□□ 2.56
Pgk1P09411 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.94■■■□□ 2.54
Pgk1P09411 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Pgk1P09411 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Pgk1P09411 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Pgk1P09411 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.81■■■□□ 2.52
Pgk1P09411 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Pgk1P09411 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.79■■■□□ 2.52
Pgk1P09411 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Pgk1P09411 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.73■■■□□ 2.51
Pgk1P09411 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Pgk1P09411 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Pgk1P09411 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Pgk1P09411 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Pgk1P09411 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Pgk1P09411 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Pgk1P09411 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Pgk1P09411 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Pgk1P09411 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
Pgk1P09411 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Pgk1P09411 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.42■■■□□ 2.46
Pgk1P09411 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.4■■■□□ 2.46
Pgk1P09411 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.45
Pgk1P09411 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.35■■■□□ 2.45
Pgk1P09411 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Pgk1P09411 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Pgk1P09411 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
Pgk1P09411 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.27■■■□□ 2.44
Pgk1P09411 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.27■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms