Protein–RNA interactions for Protein: Q8BHD0

Rab39a, Ras-related protein Rab-39A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab39aQ8BHD0 Gm25239-201ENSMUST00000174915 86 ntBASIC32.39■■■□□ 2.78
Rab39aQ8BHD0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Rab39aQ8BHD0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Rab39aQ8BHD0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Rab39aQ8BHD0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.78■■■□□ 2.36
Rab39aQ8BHD0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rab39aQ8BHD0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Rab39aQ8BHD0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Rab39aQ8BHD0 Psd-208ENSMUST00000224556 2034 ntBASIC29.38■■■□□ 2.29
Rab39aQ8BHD0 Gm15042-201ENSMUST00000120212 883 ntBASIC28.6■■■□□ 2.17
Rab39aQ8BHD0 Gm15045-201ENSMUST00000117359 883 ntBASIC28■■■□□ 2.07
Rab39aQ8BHD0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Rab39aQ8BHD0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Rab39aQ8BHD0 Gm24109-201ENSMUST00000175489 103 ntBASIC27.91■■■□□ 2.06
Rab39aQ8BHD0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Rab39aQ8BHD0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Rab39aQ8BHD0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Rab39aQ8BHD0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
Rab39aQ8BHD0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Rab39aQ8BHD0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Rab39aQ8BHD0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Rab39aQ8BHD0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.56■■■□□ 2
Rab39aQ8BHD0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rab39aQ8BHD0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Rab39aQ8BHD0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rab39aQ8BHD0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Rab39aQ8BHD0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rab39aQ8BHD0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.13■■□□□ 1.93
Rab39aQ8BHD0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Rab39aQ8BHD0 Gm23366-201ENSMUST00000175022 89 ntBASIC27.09■■□□□ 1.93
Rab39aQ8BHD0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
Rab39aQ8BHD0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rab39aQ8BHD0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rab39aQ8BHD0 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.88■■□□□ 1.89
Rab39aQ8BHD0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rab39aQ8BHD0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rab39aQ8BHD0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Rab39aQ8BHD0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rab39aQ8BHD0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.65■■□□□ 1.86
Rab39aQ8BHD0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Rab39aQ8BHD0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rab39aQ8BHD0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Rab39aQ8BHD0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Rab39aQ8BHD0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rab39aQ8BHD0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Rab39aQ8BHD0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Rab39aQ8BHD0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.46■■□□□ 1.83
Rab39aQ8BHD0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Rab39aQ8BHD0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.44■■□□□ 1.82
Rab39aQ8BHD0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rab39aQ8BHD0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Rab39aQ8BHD0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.28■■□□□ 1.8
Rab39aQ8BHD0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rab39aQ8BHD0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.11■■□□□ 1.77
Rab39aQ8BHD0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Rab39aQ8BHD0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Rab39aQ8BHD0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.08■■□□□ 1.76
Rab39aQ8BHD0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rab39aQ8BHD0 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.87■■□□□ 1.73
Rab39aQ8BHD0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rab39aQ8BHD0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.83■■□□□ 1.73
Rab39aQ8BHD0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rab39aQ8BHD0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
Rab39aQ8BHD0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rab39aQ8BHD0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rab39aQ8BHD0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.64■■□□□ 1.69
Rab39aQ8BHD0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
Rab39aQ8BHD0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.61■■□□□ 1.69
Rab39aQ8BHD0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rab39aQ8BHD0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rab39aQ8BHD0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rab39aQ8BHD0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rab39aQ8BHD0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rab39aQ8BHD0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rab39aQ8BHD0 Gm25238-201ENSMUST00000174914 89 ntBASIC25.46■■□□□ 1.67
Rab39aQ8BHD0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.41■■□□□ 1.66
Rab39aQ8BHD0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rab39aQ8BHD0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
Rab39aQ8BHD0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.39■■□□□ 1.65
Rab39aQ8BHD0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rab39aQ8BHD0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.36■■□□□ 1.65
Rab39aQ8BHD0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.35■■□□□ 1.65
Rab39aQ8BHD0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Rab39aQ8BHD0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rab39aQ8BHD0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rab39aQ8BHD0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rab39aQ8BHD0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rab39aQ8BHD0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rab39aQ8BHD0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rab39aQ8BHD0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rab39aQ8BHD0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Rab39aQ8BHD0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Rab39aQ8BHD0 Gm27325-201ENSMUST00000175467 74 ntBASIC25.11■■□□□ 1.61
Rab39aQ8BHD0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rab39aQ8BHD0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rab39aQ8BHD0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.05■■□□□ 1.6
Rab39aQ8BHD0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rab39aQ8BHD0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rab39aQ8BHD0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rab39aQ8BHD0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms