Protein–RNA interactions for Protein: Q9CQC8

Spg21, Maspardin, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg21Q9CQC8 Gm25239-201ENSMUST00000174915 86 ntBASIC41.54■■■■■ 4.24
Spg21Q9CQC8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.5■■■■□ 3.75
Spg21Q9CQC8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
Spg21Q9CQC8 Gm15042-201ENSMUST00000120212 883 ntBASIC36.13■■■■□ 3.37
Spg21Q9CQC8 Gm24109-201ENSMUST00000175489 103 ntBASIC36.05■■■■□ 3.36
Spg21Q9CQC8 Gm15045-201ENSMUST00000117359 883 ntBASIC35.26■■■■□ 3.24
Spg21Q9CQC8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Spg21Q9CQC8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.08■■■■□ 3.21
Spg21Q9CQC8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.01■■■■□ 3.2
Spg21Q9CQC8 Gm23366-201ENSMUST00000175022 89 ntBASIC34.69■■■■□ 3.14
Spg21Q9CQC8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Spg21Q9CQC8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Spg21Q9CQC8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
Spg21Q9CQC8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Spg21Q9CQC8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.72■■■□□ 2.99
Spg21Q9CQC8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.44■■■□□ 2.94
Spg21Q9CQC8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.43■■■□□ 2.94
Spg21Q9CQC8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.42■■■□□ 2.94
Spg21Q9CQC8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.39■■■□□ 2.94
Spg21Q9CQC8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Spg21Q9CQC8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.08■■■□□ 2.89
Spg21Q9CQC8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Spg21Q9CQC8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Spg21Q9CQC8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Spg21Q9CQC8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.92■■■□□ 2.86
Spg21Q9CQC8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Spg21Q9CQC8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.9■■■□□ 2.86
Spg21Q9CQC8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Spg21Q9CQC8 Gm25238-201ENSMUST00000174914 89 ntBASIC32.84■■■□□ 2.85
Spg21Q9CQC8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Spg21Q9CQC8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.54■■■□□ 2.8
Spg21Q9CQC8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
Spg21Q9CQC8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.31■■■□□ 2.76
Spg21Q9CQC8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.22■■■□□ 2.75
Spg21Q9CQC8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Spg21Q9CQC8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
Spg21Q9CQC8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Spg21Q9CQC8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.93■■■□□ 2.7
Spg21Q9CQC8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Spg21Q9CQC8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Spg21Q9CQC8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
Spg21Q9CQC8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.83■■■□□ 2.69
Spg21Q9CQC8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.64■■■□□ 2.66
Spg21Q9CQC8 Gm27325-201ENSMUST00000175467 74 ntBASIC31.63■■■□□ 2.65
Spg21Q9CQC8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.6■■■□□ 2.65
Spg21Q9CQC8 Gm25262-201ENSMUST00000174934 133 ntBASIC31.6■■■□□ 2.65
Spg21Q9CQC8 Psd-208ENSMUST00000224556 2034 ntBASIC31.56■■■□□ 2.64
Spg21Q9CQC8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Spg21Q9CQC8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Spg21Q9CQC8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Spg21Q9CQC8 Rab21-202ENSMUST00000218831 843 ntBASIC31.19■■■□□ 2.58
Spg21Q9CQC8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Spg21Q9CQC8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.13■■■□□ 2.57
Spg21Q9CQC8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.11■■■□□ 2.57
Spg21Q9CQC8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.07■■■□□ 2.56
Spg21Q9CQC8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.04■■■□□ 2.56
Spg21Q9CQC8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31■■■□□ 2.55
Spg21Q9CQC8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Spg21Q9CQC8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Spg21Q9CQC8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
Spg21Q9CQC8 Gm26115-201ENSMUST00000175605 87 ntBASIC30.88■■■□□ 2.53
Spg21Q9CQC8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Spg21Q9CQC8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.81■■■□□ 2.52
Spg21Q9CQC8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Spg21Q9CQC8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
Spg21Q9CQC8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Spg21Q9CQC8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.71■■■□□ 2.51
Spg21Q9CQC8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Spg21Q9CQC8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Spg21Q9CQC8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Spg21Q9CQC8 Gm8109-201ENSMUST00000194076 746 ntBASIC30.67■■■□□ 2.5
Spg21Q9CQC8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.63■■■□□ 2.49
Spg21Q9CQC8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.62■■■□□ 2.49
Spg21Q9CQC8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.62■■■□□ 2.49
Spg21Q9CQC8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Spg21Q9CQC8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Spg21Q9CQC8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Spg21Q9CQC8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Spg21Q9CQC8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.47■■■□□ 2.47
Spg21Q9CQC8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Spg21Q9CQC8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Spg21Q9CQC8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Spg21Q9CQC8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
Spg21Q9CQC8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Spg21Q9CQC8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Spg21Q9CQC8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Spg21Q9CQC8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.23■■■□□ 2.43
Spg21Q9CQC8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Spg21Q9CQC8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.14■■■□□ 2.42
Spg21Q9CQC8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Spg21Q9CQC8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Spg21Q9CQC8 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.07■■■□□ 2.4
Spg21Q9CQC8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
Spg21Q9CQC8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.03■■■□□ 2.4
Spg21Q9CQC8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Spg21Q9CQC8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Spg21Q9CQC8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Spg21Q9CQC8 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.93■■■□□ 2.38
Spg21Q9CQC8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Spg21Q9CQC8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms