Protein–RNA interactions for Protein: K7N6U2

Gm3542, Predicted gene 3542, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3542K7N6U2 Gm25239-201ENSMUST00000174915 86 ntBASIC39.07■■■■□ 3.85
Gm3542K7N6U2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.24■■■■□ 3.39
Gm3542K7N6U2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Gm3542K7N6U2 Gm15042-201ENSMUST00000120212 883 ntBASIC33.94■■■■□ 3.02
Gm3542K7N6U2 Gm24109-201ENSMUST00000175489 103 ntBASIC33.94■■■■□ 3.02
Gm3542K7N6U2 Gm15045-201ENSMUST00000117359 883 ntBASIC33.11■■■□□ 2.89
Gm3542K7N6U2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Gm3542K7N6U2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
Gm3542K7N6U2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
Gm3542K7N6U2 Gm23366-201ENSMUST00000175022 89 ntBASIC32.66■■■□□ 2.82
Gm3542K7N6U2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Gm3542K7N6U2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Gm3542K7N6U2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.75■■■□□ 2.67
Gm3542K7N6U2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Gm3542K7N6U2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Gm3542K7N6U2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.48■■■□□ 2.63
Gm3542K7N6U2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.44■■■□□ 2.62
Gm3542K7N6U2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
Gm3542K7N6U2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Gm3542K7N6U2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Gm3542K7N6U2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
Gm3542K7N6U2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Gm3542K7N6U2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Gm3542K7N6U2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.01■■■□□ 2.55
Gm3542K7N6U2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Gm3542K7N6U2 Gm25238-201ENSMUST00000174914 89 ntBASIC30.9■■■□□ 2.54
Gm3542K7N6U2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Gm3542K7N6U2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.73■■■□□ 2.51
Gm3542K7N6U2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Gm3542K7N6U2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Gm3542K7N6U2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
Gm3542K7N6U2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.46
Gm3542K7N6U2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Gm3542K7N6U2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.22■■■□□ 2.43
Gm3542K7N6U2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Gm3542K7N6U2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
Gm3542K7N6U2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Gm3542K7N6U2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.04■■■□□ 2.4
Gm3542K7N6U2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.01■■■□□ 2.39
Gm3542K7N6U2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Gm3542K7N6U2 Gm25262-201ENSMUST00000174934 133 ntBASIC29.79■■■□□ 2.36
Gm3542K7N6U2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Gm3542K7N6U2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.73■■■□□ 2.35
Gm3542K7N6U2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
Gm3542K7N6U2 Gm27325-201ENSMUST00000175467 74 ntBASIC29.71■■■□□ 2.35
Gm3542K7N6U2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.55■■■□□ 2.32
Gm3542K7N6U2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Gm3542K7N6U2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.4■■■□□ 2.3
Gm3542K7N6U2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Gm3542K7N6U2 Rab21-202ENSMUST00000218831 843 ntBASIC29.35■■■□□ 2.29
Gm3542K7N6U2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.29■■■□□ 2.28
Gm3542K7N6U2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Gm3542K7N6U2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.24■■■□□ 2.27
Gm3542K7N6U2 Psd-208ENSMUST00000224556 2034 ntBASIC29.23■■■□□ 2.27
Gm3542K7N6U2 Gm26115-201ENSMUST00000175605 87 ntBASIC29.15■■■□□ 2.26
Gm3542K7N6U2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Gm3542K7N6U2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
Gm3542K7N6U2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Gm3542K7N6U2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.09■■■□□ 2.25
Gm3542K7N6U2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.05■■■□□ 2.24
Gm3542K7N6U2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Gm3542K7N6U2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Gm3542K7N6U2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Gm3542K7N6U2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.93■■■□□ 2.22
Gm3542K7N6U2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.92■■■□□ 2.22
Gm3542K7N6U2 Gm8109-201ENSMUST00000194076 746 ntBASIC28.89■■■□□ 2.22
Gm3542K7N6U2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.84■■■□□ 2.21
Gm3542K7N6U2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Gm3542K7N6U2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Gm3542K7N6U2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.74■■■□□ 2.19
Gm3542K7N6U2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Gm3542K7N6U2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.73■■■□□ 2.19
Gm3542K7N6U2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.71■■■□□ 2.19
Gm3542K7N6U2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Gm3542K7N6U2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Gm3542K7N6U2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.63■■■□□ 2.17
Gm3542K7N6U2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Gm3542K7N6U2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Gm3542K7N6U2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Gm3542K7N6U2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Gm3542K7N6U2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Gm3542K7N6U2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Gm3542K7N6U2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
Gm3542K7N6U2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Gm3542K7N6U2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.35■■■□□ 2.13
Gm3542K7N6U2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Gm3542K7N6U2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Gm3542K7N6U2 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.32■■■□□ 2.12
Gm3542K7N6U2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Gm3542K7N6U2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.3■■■□□ 2.12
Gm3542K7N6U2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.11
Gm3542K7N6U2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Gm3542K7N6U2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Gm3542K7N6U2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.18■■■□□ 2.1
Gm3542K7N6U2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Gm3542K7N6U2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Gm3542K7N6U2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Gm3542K7N6U2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.11■■■□□ 2.09
Gm3542K7N6U2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
Gm3542K7N6U2 Gm27322-201ENSMUST00000184007 104 ntBASIC28.08■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms