RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 GPB2P39717 880 aa1.22□□□□□ -2.21
snR47snR47 GAT1P43574 510 aa1.22□□□□□ -2.21
snR47snR47 MRPS35P53292 345 aa1.22□□□□□ -2.21
snR47snR47 RSC4Q02206 625 aa1.22□□□□□ -2.21
snR47snR47 ECM23Q02710 187 aa1.22□□□□□ -2.21
snR47snR47 UTP5Q04177 643 aaKnown RBP1.22□□□□□ -2.21
snR47snR47 THI7Q05998 598 aa1.22□□□□□ -2.21
snR47snR47 PMT7Q06644 662 aa1.22□□□□□ -2.21
snR47snR47 ENB1Q08299 606 aa1.22□□□□□ -2.21
snR47snR47 LSO1Q3E827 93 aa1.22□□□□□ -2.21
snR47snR47 YKL077WP36081 392 aa1.21□□□□□ -2.22
snR47snR47 ECM2P38241 364 aaKnown RBP1.21□□□□□ -2.22
snR47snR47 RFC5P38251 354 aa1.21□□□□□ -2.22
snR47snR47 SUL1P38359 859 aa1.21□□□□□ -2.22
snR47snR47 SDS3P40505 327 aa1.21□□□□□ -2.22
snR47snR47 CHA4P43634 648 aa1.21□□□□□ -2.22
snR47snR47 MTR4P47047 1073 aaKnown RBP1.21□□□□□ -2.22
snR47snR47 GCV2P49095 1034 aa1.21□□□□□ -2.22
snR47snR47 GTF1P53260 183 aaPredicted RBP1.21□□□□□ -2.22
snR47snR47 MUK1Q02866 612 aa1.21□□□□□ -2.22
snR47snR47 TDA9Q04545 1251 aa1.21□□□□□ -2.22
snR47snR47 ADY3Q07732 790 aa1.21□□□□□ -2.22
snR47snR47 RSB1Q08417 382 aa1.21□□□□□ -2.22
snR47snR47 VTS1Q08831 523 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
snR47snR47 LAP2Q10740 671 aa1.21□□□□□ -2.22
snR47snR47 PPZ2P33329 710 aa1.2□□□□□ -2.22
snR47snR47 KTR4P38131 464 aa1.2□□□□□ -2.22
snR47snR47 DMA1P38823 416 aa1.2□□□□□ -2.22
snR47snR47 RPL34BP40525 121 aaKnown RBP1.2□□□□□ -2.22
snR47snR47 MET12P46151 657 aa1.2□□□□□ -2.22
snR47snR47 NUT1P53114 1132 aa1.2□□□□□ -2.22
snR47snR47 PUS2P53167 370 aa1.2□□□□□ -2.22
snR47snR47 TNA1P53322 534 aa1.2□□□□□ -2.22
snR47snR47 GIS2P53849 153 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
snR47snR47 HIS5P07172 385 aa1.19□□□□□ -2.22
snR47snR47 KIN2P13186 1147 aaKnown RBP1.19□□□□□ -2.22
snR47snR47 VPS53P47061 822 aa1.19□□□□□ -2.22
snR47snR47 HOS3Q02959 697 aaKnown RBP1.19□□□□□ -2.22
snR47snR47 CWC15Q03772 175 aaKnown RBP1.19□□□□□ -2.22
snR47snR47 KCS1Q12494 1050 aa1.19□□□□□ -2.22
snR47snR47 FLP1P03870 423 aa1.18□□□□□ -2.22
snR47snR47 RRN6P32786 894 aa1.18□□□□□ -2.22
snR47snR47 SHU2P38957 223 aa1.18□□□□□ -2.22
snR47snR47 XKS1P42826 600 aa1.18□□□□□ -2.22
snR47snR47 NOG1Q02892 647 aaKnown RBP1.18□□□□□ -2.22
snR47snR47 MSC2Q03455 724 aa1.18□□□□□ -2.22
snR47snR47 ARO10Q06408 635 aa1.18□□□□□ -2.22
snR47snR47 TPO1Q07824 586 aa1.18□□□□□ -2.22
snR47snR47 ERG4P25340 473 aa1.17□□□□□ -2.22
snR47snR47 RPN3P40016 523 aaKnown RBP1.17□□□□□ -2.22
snR47snR47 MEP2P41948 499 aa1.17□□□□□ -2.22
snR47snR47 TAH11P47112 604 aa1.17□□□□□ -2.22
snR47snR47 YMR206WQ03695 313 aa1.17□□□□□ -2.22
snR47snR47 RKM2Q03942 479 aa1.17□□□□□ -2.22
snR47snR47 CIR2Q08822 631 aa1.17□□□□□ -2.22
snR47snR47 MRH1Q12117 320 aaPredicted RBP1.17□□□□□ -2.22
snR47snR47 PPR1P07272 904 aaPredicted RBP1.16□□□□□ -2.22
snR47snR47 GFA1P14742 717 aaKnown RBP1.16□□□□□ -2.22
snR47snR47 APL1P27351 700 aa1.16□□□□□ -2.22
snR47snR47 KIP1P28742 1111 aa1.16□□□□□ -2.22
snR47snR47 DED81P38707 554 aaKnown RBP1.16□□□□□ -2.22
snR47snR47 RVS167P39743 482 aaKnown RBP1.16□□□□□ -2.22
snR47snR47 MND2P40577 368 aa1.16□□□□□ -2.22
snR47snR47 VMA4P22203 233 aaKnown RBP1.15□□□□□ -2.23
snR47snR47 TDP1P38319 544 aa1.15□□□□□ -2.23
snR47snR47 MET30P39014 640 aa1.15□□□□□ -2.23
snR47snR47 CDC55Q00362 526 aa1.15□□□□□ -2.23
snR47snR47 RNT1Q02555 471 aa1.15□□□□□ -2.23
snR47snR47 PNP1Q05788 311 aa1.15□□□□□ -2.23
snR47snR47 ATG13Q06628 738 aa1.15□□□□□ -2.23
snR47snR47 HBT1Q07653 1046 aaKnown RBP1.15□□□□□ -2.23
snR47snR47 SVS1Q12254 260 aa1.15□□□□□ -2.23
snR47snR47 RPP2AP05319 106 aaKnown RBP1.14□□□□□ -2.23
snR47snR47 PEP7P32609 515 aa1.14□□□□□ -2.23
snR47snR47 MPS1P54199 764 aa1.14□□□□□ -2.23
snR47snR47 RGT2Q12300 763 aa1.14□□□□□ -2.23
snR47snR47 TRP4P07285 380 aaPredicted RBP1.13□□□□□ -2.23
snR47snR47 ADY2P25613 283 aa1.13□□□□□ -2.23
snR47snR47 TTI1P36097 1038 aa1.13□□□□□ -2.23
snR47snR47 POA1P38218 177 aa1.13□□□□□ -2.23
snR47snR47 BNA3P47039 444 aaKnown RBP1.13□□□□□ -2.23
snR47snR47 VPS73P53142 486 aaKnown RBP1.13□□□□□ -2.23
snR47snR47 YNR063WP53749 607 aa1.13□□□□□ -2.23
snR47snR47 MAP1Q01662 387 aaKnown RBP RIP-Chip data1.13□□□□□ -2.23not detected
snR47snR47 GUP2Q08929 609 aa1.13□□□□□ -2.23
snR47snR47 SCP160P06105 1222 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
snR47snR47 ALG7P07286 448 aa1.12□□□□□ -2.23
snR47snR47 HCA4P20448 770 aaKnown RBP1.12□□□□□ -2.23
snR47snR47 MSH3P25336 1018 aa1.12□□□□□ -2.23
snR47snR47 KAR4P25583 335 aa1.12□□□□□ -2.23
snR47snR47 AFG2P32794 780 aa1.12□□□□□ -2.23
snR47snR47 RDH54P38086 958 aa1.12□□□□□ -2.23
snR47snR47 RPN1P38764 993 aaKnown RBP1.12□□□□□ -2.23
snR47snR47 YIL166CP40445 542 aa1.12□□□□□ -2.23
snR47snR47 UFD2P54860 961 aa1.12□□□□□ -2.23
snR47snR47 NPC2Q12408 173 aa1.12□□□□□ -2.23
snR47snR47 ADD66P36040 267 aa1.11□□□□□ -2.23
snR47snR47 ATG14P38270 344 aa1.11□□□□□ -2.23
snR47snR47 YHL017WP38745 532 aa1.11□□□□□ -2.23
snR47snR47 RSP5P39940 809 aaKnown RBP1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms