RNA–Protein interactions for RNA: YPR107C

YTH1, Transcript of Essential RNA-binding component of cleavage and polyadenylation factor, yeastyeast

Gene YTH1, Length 627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YTH1YPR107C MSH2P25847 964 aa8.88□□□□□ -0.99
YTH1YPR107C MLS1P30952 554 aa8.88□□□□□ -0.99
YTH1YPR107C MAE1P36013 669 aaKnown RBP8.88□□□□□ -0.99
YTH1YPR107C YPL260WQ08977 551 aa8.88□□□□□ -0.99
YTH1YPR107C NOP14Q99207 810 aaKnown RBP8.88□□□□□ -0.99
YTH1YPR107C TY4B-PA0A0B7P3V8 1104 aa8.87□□□□□ -0.99
YTH1YPR107C RTA1P53047 317 aa8.87□□□□□ -0.99
YTH1YPR107C CAF120P53836 1060 aa8.87□□□□□ -0.99
YTH1YPR107C TY4A-HQ6Q5P6 413 aa8.87□□□□□ -0.99
YTH1YPR107C SSB1P11484 613 aaKnown RBP8.86□□□□□ -0.99
YTH1YPR107C PGM2P37012 569 aaKnown RBP8.86□□□□□ -0.99
YTH1YPR107C CCC2P38995 1004 aa8.86□□□□□ -0.99
YTH1YPR107C SSB2P40150 613 aaKnown RBP8.86□□□□□ -0.99
YTH1YPR107C DSE4P53753 1117 aa8.86□□□□□ -0.99
YTH1YPR107C SPP382Q06411 708 aaPredicted RBP8.86□□□□□ -0.99
YTH1YPR107C ALG6Q12001 544 aaKnown RBP8.86□□□□□ -0.99
YTH1YPR107C SRM1P21827 482 aa8.85□□□□□ -0.99
YTH1YPR107C TOM20P35180 183 aa8.85□□□□□ -0.99
YTH1YPR107C GEM1P39722 662 aa8.85□□□□□ -0.99
YTH1YPR107C YGR045CP53229 120 aa8.85□□□□□ -0.99
YTH1YPR107C NPL3Q01560 414 aaKnown RBP RIP-Chip data8.85□□□□□ -0.99 RIP-Chip
YTH1YPR107C UGO1Q03327 502 aa8.85□□□□□ -0.99
YTH1YPR107C NHA1Q99271 985 aa8.85□□□□□ -0.99
YTH1YPR107C NFS1P25374 497 aa8.84□□□□□ -0.99
YTH1YPR107C SFP1P32432 683 aa8.84□□□□□ -0.99
YTH1YPR107C GRX4P32642 244 aa8.84□□□□□ -0.99
YTH1YPR107C QNS1P38795 714 aaKnown RBP8.84□□□□□ -0.99
YTH1YPR107C SIP5P40210 489 aaKnown RBP8.84□□□□□ -0.99
YTH1YPR107C YOR223WQ12015 292 aa8.84□□□□□ -0.99
YTH1YPR107C ERS1P17261 260 aa8.83□□□□□ -1
YTH1YPR107C BET3P36149 193 aa8.83□□□□□ -1
YTH1YPR107C HSV2P50079 448 aaPredicted RBP8.83□□□□□ -1
YTH1YPR107C NTG2Q08214 380 aa8.83□□□□□ -1
YTH1YPR107C AAR2P32357 355 aaPredicted RBP8.82□□□□□ -1
YTH1YPR107C HBS1P32769 611 aaKnown RBP8.82□□□□□ -1
YTH1YPR107C CRP1P38845 465 aaKnown RBP8.82□□□□□ -1
YTH1YPR107C GUS1P46655 708 aaKnown RBP RIP-Chip data8.82□□□□□ -1not detected
YTH1YPR107C RSA3Q05942 220 aaKnown RBP8.82□□□□□ -1
YTH1YPR107C YDR306CQ06640 478 aa8.82□□□□□ -1
YTH1YPR107C GIC2Q06648 383 aa8.82□□□□□ -1
YTH1YPR107C HBN1Q96VH4 193 aa8.82□□□□□ -1
YTH1YPR107C NNK1P36003 928 aa8.81□□□□□ -1
YTH1YPR107C GDH3P39708 457 aa8.81□□□□□ -1
YTH1YPR107C JJJ3P47138 172 aa8.81□□□□□ -1
YTH1YPR107C ELA1P53861 379 aaPredicted RBP8.81□□□□□ -1
YTH1YPR107C DNM1P54861 757 aa8.81□□□□□ -1
YTH1YPR107C DOT1Q04089 582 aaKnown RBP8.81□□□□□ -1
YTH1YPR107C TOM70P07213 617 aaKnown RBP8.8□□□□□ -1
YTH1YPR107C UBP12P39538 1254 aa8.8□□□□□ -1
YTH1YPR107C HRK1Q08732 759 aaKnown RBP8.8□□□□□ -1
YTH1YPR107C SPO21Q12411 609 aa8.8□□□□□ -1
YTH1YPR107C RET1P22276 1149 aaKnown RBP8.79□□□□□ -1
YTH1YPR107C DOM34P33309 386 aa8.79□□□□□ -1
YTH1YPR107C PEX6P33760 1030 aa8.79□□□□□ -1
YTH1YPR107C PNT1P38969 423 aa8.79□□□□□ -1
YTH1YPR107C KIP3P53086 805 aaKnown RBP8.79□□□□□ -1
YTH1YPR107C DPH6Q12429 685 aa8.79□□□□□ -1
YTH1YPR107C SIT1P39980 628 aa8.78□□□□□ -1
YTH1YPR107C SRP1Q02821 542 aaKnown RBP8.78□□□□□ -1
YTH1YPR107C DUS3Q06053 668 aaKnown RBP8.78□□□□□ -1
YTH1YPR107C ADR1P07248 1323 aa8.78□□□□□ -1
YTH1YPR107C YER152CP10356 443 aa8.77□□□□□ -1.01
YTH1YPR107C KIP1P28742 1111 aa8.77□□□□□ -1.01
YTH1YPR107C PPH3P32345 308 aa8.77□□□□□ -1.01
YTH1YPR107C SMY2P32909 740 aaKnown RBP8.77□□□□□ -1.01
YTH1YPR107C RPN3P40016 523 aaKnown RBP8.77□□□□□ -1.01
YTH1YPR107C UBP6P43593 499 aaKnown RBP8.77□□□□□ -1.01
YTH1YPR107C YLR257WQ06146 321 aaKnown RBP8.77□□□□□ -1.01
YTH1YPR107C ADE8P04161 214 aa8.76□□□□□ -1.01
YTH1YPR107C RPL11AP0C0W9 174 aaKnown RBP8.76□□□□□ -1.01
YTH1YPR107C RPL8AP17076 256 aaKnown RBP8.76□□□□□ -1.01
YTH1YPR107C RPL11BQ3E757 174 aaPredicted RBP8.76□□□□□ -1.01
YTH1YPR107C PET10P36139 283 aa8.75□□□□□ -1.01
YTH1YPR107C TFB2Q02939 513 aa8.75□□□□□ -1.01
YTH1YPR107C GSY1P23337 708 aa8.74□□□□□ -1.01
YTH1YPR107C YBR284WP38150 797 aa8.74□□□□□ -1.01
YTH1YPR107C YEN1P40028 759 aa8.74□□□□□ -1.01
YTH1YPR107C YNR029CP53729 429 aaKnown RBP8.74□□□□□ -1.01
YTH1YPR107C THS1P04801 734 aaKnown RBP8.73□□□□□ -1.01
YTH1YPR107C TOP3P13099 656 aa8.73□□□□□ -1.01
YTH1YPR107C RRM3P38766 723 aa8.73□□□□□ -1.01
YTH1YPR107C MAL11P53048 616 aa8.73□□□□□ -1.01
YTH1YPR107C LCD1Q04377 747 aa8.73□□□□□ -1.01
YTH1YPR107C ACM1Q08981 209 aa8.73□□□□□ -1.01
YTH1YPR107C MDM12Q92328 271 aa8.73□□□□□ -1.01
YTH1YPR107C MSD1P15179 658 aaKnown RBP8.72□□□□□ -1.01
YTH1YPR107C HLJ1P48353 224 aa8.72□□□□□ -1.01
YTH1YPR107C YRO2P38079 344 aa8.71□□□□□ -1.02
YTH1YPR107C ZDS1P50111 915 aaKnown RBP8.71□□□□□ -1.02
YTH1YPR107C NCE103P53615 221 aa8.71□□□□□ -1.02
YTH1YPR107C MTC5Q03897 1148 aa8.71□□□□□ -1.02
YTH1YPR107C YPR071WQ12346 211 aa8.71□□□□□ -1.02
YTH1YPR107C DBP2P24783 546 aaKnown RBP8.7□□□□□ -1.02
YTH1YPR107C GAR1P28007 205 aaKnown RBP8.7□□□□□ -1.02
YTH1YPR107C GPT2P36148 743 aa8.7□□□□□ -1.02
YTH1YPR107C GPB2P39717 880 aa8.7□□□□□ -1.02
YTH1YPR107C ALG2P43636 503 aa8.7□□□□□ -1.02
YTH1YPR107C PMT3P47190 753 aa8.7□□□□□ -1.02
YTH1YPR107C TNA1P53322 534 aa8.7□□□□□ -1.02
YTH1YPR107C HOS3Q02959 697 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms