RNA–Protein interactions for RNA: YPL253C

VIK1, Transcript of Protein that forms a kinesin-14 heterodimeric motor with Kar3p, yeast

Gene VIK1, Length 1,944 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VIK1	YPL253C	AFG2	P32794	780 aa		3.07	□□□□□ -1.92
VIK1	YPL253C	RSB1	Q08417	382 aa		3.07	□□□□□ -1.92
VIK1	YPL253C	RIB2	Q12362	591 aa	Known RBP	3.07	□□□□□ -1.92
VIK1	YPL253C	DCG1	P32460	244 aa		3.07	□□□□□ -1.92
VIK1	YPL253C	CIC1	P38779	376 aa	Known RBP	3.07	□□□□□ -1.92
VIK1	YPL253C	PIK1	P39104	1066 aa		3.07	□□□□□ -1.92
VIK1	YPL253C	YAP6	Q03935	383 aa		3.07	□□□□□ -1.92
VIK1	YPL253C	VPS62	P53285	467 aa		3.06	□□□□□ -1.92
VIK1	YPL253C	TNA1	P53322	534 aa		3.06	□□□□□ -1.92
VIK1	YPL253C	RSM24	Q03976	319 aa		3.06	□□□□□ -1.92
VIK1	YPL253C	PPM2	Q08282	695 aa		3.06	□□□□□ -1.92
VIK1	YPL253C	HAT1	Q12341	374 aa		3.06	□□□□□ -1.92
VIK1	YPL253C	RFC5	P38251	354 aa		3.05	□□□□□ -1.92
VIK1	YPL253C	PEX28	P38848	579 aa		3.05	□□□□□ -1.92
VIK1	YPL253C	RSM26	P47141	266 aa		3.05	□□□□□ -1.92
VIK1	YPL253C	GCV2	P49095	1034 aa		3.05	□□□□□ -1.92
VIK1	YPL253C	YLR224W	Q05947	369 aa		3.05	□□□□□ -1.92
VIK1	YPL253C	YFL054C	P43549	646 aa		3.05	□□□□□ -1.92
VIK1	YPL253C	GTF1	P53260	183 aa	Predicted RBP	3.05	□□□□□ -1.92
VIK1	YPL253C	ULP1	Q02724	621 aa		3.05	□□□□□ -1.92
VIK1	YPL253C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.05	□□□□□ -1.92	not detected
VIK1	YPL253C	PRP40	P33203	583 aa	Known RBP	3.04	□□□□□ -1.92
VIK1	YPL253C	GEF1	P37020	779 aa		3.04	□□□□□ -1.92
VIK1	YPL253C	YGL140C	P53120	1219 aa		3.04	□□□□□ -1.92
VIK1	YPL253C	URN1	Q06525	465 aa	Known RBP	3.04	□□□□□ -1.92
VIK1	YPL253C	EMC1	P25574	760 aa		3.03	□□□□□ -1.92
VIK1	YPL253C	MOH1	P38191	138 aa		3.03	□□□□□ -1.92
VIK1	YPL253C	SIP5	P40210	489 aa	Known RBP	3.03	□□□□□ -1.92
VIK1	YPL253C	PBP1	P53297	722 aa	Known RBP	3.03	□□□□□ -1.92
VIK1	YPL253C	HMI1	Q12039	706 aa		3.03	□□□□□ -1.92
VIK1	YPL253C	PTC5	Q12511	572 aa		3.03	□□□□□ -1.92
VIK1	YPL253C	PHO4	P07270	312 aa	Known RBP	3.03	□□□□□ -1.92
VIK1	YPL253C	VPS35	P34110	944 aa		3.03	□□□□□ -1.92
VIK1	YPL253C	EST2	Q06163	884 aa		3.03	□□□□□ -1.92
VIK1	YPL253C	KAR2	P16474	682 aa	Known RBP	3.02	□□□□□ -1.93
VIK1	YPL253C	YHL050C	P38721	697 aa		3.02	□□□□□ -1.93
VIK1	YPL253C	YHR219W	P38900	624 aa		3.02	□□□□□ -1.93
VIK1	YPL253C	DAL4	Q04895	635 aa		3.02	□□□□□ -1.93
VIK1	YPL253C	GCD6	P32501	712 aa	Known RBP	3.01	□□□□□ -1.93
VIK1	YPL253C	SQT1	P35184	431 aa		3.01	□□□□□ -1.93
VIK1	YPL253C	ALG3	P38179	458 aa		3.01	□□□□□ -1.93
VIK1	YPL253C	RPN3	P40016	523 aa	Known RBP	3.01	□□□□□ -1.93
VIK1	YPL253C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.01	□□□□□ -1.93	not detected
VIK1	YPL253C	TOS4	Q06266	489 aa		3.01	□□□□□ -1.93
VIK1	YPL253C	OAR1	P35731	278 aa		3.01	□□□□□ -1.93
VIK1	YPL253C	PLB1	P39105	664 aa		3.01	□□□□□ -1.93
VIK1	YPL253C	SNM1	P40993	198 aa		3.01	□□□□□ -1.93
VIK1	YPL253C	DAK2	P43550	591 aa		3.01	□□□□□ -1.93
VIK1	YPL253C	MET4	P32389	672 aa		2.99	□□□□□ -1.93
VIK1	YPL253C	SIZ1	Q04195	904 aa		2.99	□□□□□ -1.93
VIK1	YPL253C	NOP12	Q08208	459 aa	Known RBP	2.99	□□□□□ -1.93
VIK1	YPL253C	SVS1	Q12254	260 aa		2.99	□□□□□ -1.93
VIK1	YPL253C	APL1	P27351	700 aa		2.99	□□□□□ -1.93
VIK1	YPL253C	YPL109C	Q02981	657 aa		2.99	□□□□□ -1.93
VIK1	YPL253C	ADI1	Q03677	179 aa		2.99	□□□□□ -1.93
VIK1	YPL253C	BDF2	Q07442	638 aa		2.99	□□□□□ -1.93
VIK1	YPL253C	DED1	P06634	604 aa	Known RBP	2.98	□□□□□ -1.93
VIK1	YPL253C	KIN2	P13186	1147 aa	Known RBP	2.98	□□□□□ -1.93
VIK1	YPL253C	SEC23	P15303	768 aa	Known RBP	2.98	□□□□□ -1.93
VIK1	YPL253C	PPX1	P38698	397 aa		2.98	□□□□□ -1.93
VIK1	YPL253C	OXR1	Q08952	273 aa		2.98	□□□□□ -1.93
VIK1	YPL253C	YPL260W	Q08977	551 aa		2.98	□□□□□ -1.93
VIK1	YPL253C	MSC2	Q03455	724 aa		2.97	□□□□□ -1.93
VIK1	YPL253C	SSF1	P38789	453 aa	Predicted RBP	2.97	□□□□□ -1.93
VIK1	YPL253C	ATF1	P40353	525 aa		2.97	□□□□□ -1.93
VIK1	YPL253C	UBA2	P52488	636 aa		2.97	□□□□□ -1.93
VIK1	YPL253C	MSC6	Q08818	692 aa	Known RBP	2.97	□□□□□ -1.93
VIK1	YPL253C	HRR25	P29295	494 aa	Known RBP	2.96	□□□□□ -1.94
VIK1	YPL253C	FAA3	P39002	694 aa		2.96	□□□□□ -1.94
VIK1	YPL253C	STM1	P39015	273 aa	Known RBP	2.96	□□□□□ -1.94
VIK1	YPL253C	RAT1	Q02792	1006 aa	Known RBP	2.96	□□□□□ -1.94
VIK1	YPL253C	WHI5	Q12416	295 aa		2.96	□□□□□ -1.94
VIK1	YPL253C	HXK1	P04806	485 aa	Known RBP	2.95	□□□□□ -1.94
VIK1	YPL253C	PIC2	P40035	300 aa		2.95	□□□□□ -1.94
VIK1	YPL253C	LGE1	Q02796	332 aa	Known RBP	2.95	□□□□□ -1.94
VIK1	YPL253C	EXG2	P52911	562 aa		2.95	□□□□□ -1.94
VIK1	YPL253C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	2.95	□□□□□ -1.94	not detected
VIK1	YPL253C	AIM39	Q08223	395 aa		2.95	□□□□□ -1.94
VIK1	YPL253C	YER152C	P10356	443 aa		2.94	□□□□□ -1.94
VIK1	YPL253C	ATG13	Q06628	738 aa		2.94	□□□□□ -1.94
VIK1	YPL253C	TAF13	P11747	167 aa		2.93	□□□□□ -1.94
VIK1	YPL253C	PFK1	P16861	987 aa	Known RBP	2.93	□□□□□ -1.94
VIK1	YPL253C	PEP7	P32609	515 aa		2.93	□□□□□ -1.94
VIK1	YPL253C	RPT1	P33299	467 aa	Known RBP	2.93	□□□□□ -1.94
VIK1	YPL253C	MND2	P40577	368 aa		2.93	□□□□□ -1.94
VIK1	YPL253C	THI12	P42883	340 aa		2.93	□□□□□ -1.94
VIK1	YPL253C	THI5	P43534	340 aa		2.93	□□□□□ -1.94
VIK1	YPL253C	MET12	P46151	657 aa		2.93	□□□□□ -1.94
VIK1	YPL253C	THI11	P47183	340 aa		2.93	□□□□□ -1.94
VIK1	YPL253C	THI13	Q07748	340 aa		2.93	□□□□□ -1.94
VIK1	YPL253C	TPO1	Q07824	586 aa		2.93	□□□□□ -1.94
VIK1	YPL253C	QRI1	P43123	477 aa	Known RBP	2.93	□□□□□ -1.94
VIK1	YPL253C	ADY3	Q07732	790 aa		2.93	□□□□□ -1.94
VIK1	YPL253C	ACE2	P21192	770 aa		2.92	□□□□□ -1.94
VIK1	YPL253C	IOC3	P43596	787 aa		2.92	□□□□□ -1.94
VIK1	YPL253C	CHA4	P43634	648 aa		2.92	□□□□□ -1.94
VIK1	YPL253C	ROD1	Q02805	837 aa		2.92	□□□□□ -1.94
VIK1	YPL253C	TMN2	Q04562	672 aa		2.92	□□□□□ -1.94
VIK1	YPL253C	LAS17	Q12446	633 aa		2.92	□□□□□ -1.94
VIK1	YPL253C	HIS5	P07172	385 aa		2.91	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms