RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIP100	YPL174C	RTT10	Q08924	1013 aa		2.66	□□□□□ -1.98
NIP100	YPL174C	TMA46	Q12000	345 aa	Known RBP	2.66	□□□□□ -1.98
NIP100	YPL174C	GCR1	P07261	785 aa		2.66	□□□□□ -1.98
NIP100	YPL174C	KIN2	P13186	1147 aa	Known RBP	2.66	□□□□□ -1.98
NIP100	YPL174C	RGD1	P38339	666 aa		2.66	□□□□□ -1.98
NIP100	YPL174C	SNF7	P39929	240 aa	Known RBP	2.66	□□□□□ -1.98
NIP100	YPL174C	CNN1	P43618	361 aa		2.66	□□□□□ -1.98
NIP100	YPL174C	APL1	P27351	700 aa		2.65	□□□□□ -1.98
NIP100	YPL174C	MKK2	P32491	506 aa		2.65	□□□□□ -1.98
NIP100	YPL174C	MOT2	P34909	587 aa	Known RBP	2.65	□□□□□ -1.98
NIP100	YPL174C	YJR107W	P47145	328 aa		2.65	□□□□□ -1.98
NIP100	YPL174C	RMD1	Q03441	430 aa		2.65	□□□□□ -1.98
NIP100	YPL174C	CLN2	P20438	545 aa		2.65	□□□□□ -1.99
NIP100	YPL174C	SEA4	P38164	1038 aa		2.65	□□□□□ -1.99
NIP100	YPL174C	UBP5	P39944	805 aa		2.65	□□□□□ -1.99
NIP100	YPL174C	NIT1	P40447	199 aa		2.65	□□□□□ -1.99
NIP100	YPL174C	SPT20	P50875	604 aa		2.65	□□□□□ -1.99
NIP100	YPL174C	ENV11	P53246	860 aa		2.65	□□□□□ -1.99
NIP100	YPL174C	MRPL22	P53881	309 aa		2.65	□□□□□ -1.99
NIP100	YPL174C	AIM3	P38266	947 aa	Known RBP	2.64	□□□□□ -1.99
NIP100	YPL174C	ENT3	P47160	408 aa		2.64	□□□□□ -1.99
NIP100	YPL174C	DBP5	P20449	482 aa	Known RBP	2.64	□□□□□ -1.99
NIP100	YPL174C	AFG2	P32794	780 aa		2.64	□□□□□ -1.99
NIP100	YPL174C	RDH54	P38086	958 aa		2.64	□□□□□ -1.99
NIP100	YPL174C	PIK1	P39104	1066 aa		2.64	□□□□□ -1.99
NIP100	YPL174C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
NIP100	YPL174C	FAL1	Q12099	399 aa	Known RBP	2.64	□□□□□ -1.99
NIP100	YPL174C	LPX1	Q12405	387 aa	Known RBP	2.64	□□□□□ -1.99
NIP100	YPL174C	GLT1	Q12680	2145 aa	Known RBP	2.63	□□□□□ -1.99
NIP100	YPL174C	CMP2	P14747	604 aa		2.63	□□□□□ -1.99
NIP100	YPL174C	BAS1	P22035	811 aa		2.63	□□□□□ -1.99
NIP100	YPL174C	ELM1	P32801	640 aa		2.63	□□□□□ -1.99
NIP100	YPL174C	RFC5	P38251	354 aa		2.63	□□□□□ -1.99
NIP100	YPL174C	INO1	P11986	533 aa		2.63	□□□□□ -1.99
NIP100	YPL174C	SAM35	P14693	329 aa		2.63	□□□□□ -1.99
NIP100	YPL174C	LYP1	P32487	611 aa		2.63	□□□□□ -1.99
NIP100	YPL174C	YKL107W	P34251	309 aa		2.63	□□□□□ -1.99
NIP100	YPL174C	SVF1	Q05515	481 aa		2.63	□□□□□ -1.99
NIP100	YPL174C	SVS1	Q12254	260 aa		2.63	□□□□□ -1.99
NIP100	YPL174C	ENA1	P13587	1091 aa		2.62	□□□□□ -1.99
NIP100	YPL174C	SEC26	P41810	973 aa	Known RBP	2.62	□□□□□ -1.99
NIP100	YPL174C	SNU71	P53207	620 aa	Known RBP	2.62	□□□□□ -1.99
NIP100	YPL174C	ENA2	Q01896	1091 aa		2.62	□□□□□ -1.99
NIP100	YPL174C	GDE1	Q02979	1223 aa		2.62	□□□□□ -1.99
NIP100	YPL174C	ROT1	Q03691	256 aa		2.62	□□□□□ -1.99
NIP100	YPL174C	ENA5	Q12691	1091 aa		2.62	□□□□□ -1.99
NIP100	YPL174C	THS1	P04801	734 aa	Known RBP	2.62	□□□□□ -1.99
NIP100	YPL174C	YER152C	P10356	443 aa		2.62	□□□□□ -1.99
NIP100	YPL174C	TOD6	P34219	525 aa		2.62	□□□□□ -1.99
NIP100	YPL174C	RPN3	P40016	523 aa	Known RBP	2.62	□□□□□ -1.99
NIP100	YPL174C	RIM8	P53179	542 aa		2.62	□□□□□ -1.99
NIP100	YPL174C	CYC1	P00044	109 aa	Predicted RBP	2.61	□□□□□ -1.99
NIP100	YPL174C	GTF1	P53260	183 aa	Predicted RBP	2.61	□□□□□ -1.99
NIP100	YPL174C	SGD1	Q06132	899 aa		2.61	□□□□□ -1.99
NIP100	YPL174C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
NIP100	YPL174C	GNT1	Q12096	491 aa		2.61	□□□□□ -1.99
NIP100	YPL174C	HEM13	P11353	328 aa	Known RBP	2.61	□□□□□ -1.99
NIP100	YPL174C	RER2	P35196	286 aa		2.61	□□□□□ -1.99
NIP100	YPL174C	MNR2	P35724	969 aa		2.61	□□□□□ -1.99
NIP100	YPL174C	TYW3	P53177	273 aa		2.61	□□□□□ -1.99
NIP100	YPL174C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
NIP100	YPL174C	TRP2	P00899	507 aa	Known RBP	2.6	□□□□□ -1.99
NIP100	YPL174C	RPS13	P05756	151 aa	Known RBP	2.6	□□□□□ -1.99
NIP100	YPL174C	SAH1	P39954	449 aa	Known RBP	2.6	□□□□□ -1.99
NIP100	YPL174C	YGL176C	P46945	554 aa		2.6	□□□□□ -1.99
NIP100	YPL174C	PBP1	P53297	722 aa	Known RBP	2.6	□□□□□ -1.99
NIP100	YPL174C	TIF35	Q04067	274 aa	Known RBP	2.6	□□□□□ -1.99
NIP100	YPL174C	YLR225C	Q05948	407 aa	Known RBP	2.6	□□□□□ -1.99
NIP100	YPL174C	PRI2	P20457	528 aa		2.6	□□□□□ -1.99
NIP100	YPL174C	YPR196W	Q06595	470 aa		2.6	□□□□□ -1.99
NIP100	YPL174C	OSW2	Q12202	724 aa		2.6	□□□□□ -1.99
NIP100	YPL174C	YDL177C	Q12257	170 aa		2.6	□□□□□ -1.99
NIP100	YPL174C	RKM4	Q12504	494 aa		2.6	□□□□□ -1.99
NIP100	YPL174C	CDC34	P14682	295 aa		2.59	□□□□□ -1.99
NIP100	YPL174C	PPH3	P32345	308 aa		2.59	□□□□□ -1.99
NIP100	YPL174C	UGA2	P38067	497 aa		2.59	□□□□□ -1.99
NIP100	YPL174C	MXR1	P40029	184 aa		2.59	□□□□□ -1.99
NIP100	YPL174C	TPO2	P53283	614 aa		2.59	□□□□□ -1.99
NIP100	YPL174C	RRP15	Q06511	250 aa	Predicted RBP	2.59	□□□□□ -1.99
NIP100	YPL174C	YPL277C	Q08989	487 aa		2.59	□□□□□ -1.99
NIP100	YPL174C	YFL054C	P43549	646 aa		2.59	□□□□□ -1.99
NIP100	YPL174C	RCL1	Q08096	367 aa	Predicted RBP	2.59	□□□□□ -1.99
NIP100	YPL174C	ACM1	Q08981	209 aa		2.59	□□□□□ -1.99
NIP100	YPL174C	GAL10	P04397	699 aa		2.58	□□□□□ -2
NIP100	YPL174C	NOP7	P53261	605 aa	Known RBP	2.58	□□□□□ -2
NIP100	YPL174C	ORC3	P54790	616 aa		2.58	□□□□□ -2
NIP100	YPL174C	CDA2	Q06703	312 aa		2.58	□□□□□ -2
NIP100	YPL174C	RXT3	Q07458	294 aa		2.58	□□□□□ -2
NIP100	YPL174C	ESC8	Q08119	714 aa		2.58	□□□□□ -2
NIP100	YPL174C	ABD1	P32783	436 aa	Predicted RBP	2.58	□□□□□ -2
NIP100	YPL174C	LAM1	P38851	1228 aa		2.58	□□□□□ -2
NIP100	YPL174C	FAA4	P47912	694 aa	Known RBP	2.58	□□□□□ -2
NIP100	YPL174C	YLR358C	O13565	187 aa		2.57	□□□□□ -2
NIP100	YPL174C	SNF5	P18480	905 aa		2.57	□□□□□ -2
NIP100	YPL174C	GIP4	P39732	760 aa		2.57	□□□□□ -2
NIP100	YPL174C	VAC8	P39968	578 aa		2.57	□□□□□ -2
NIP100	YPL174C	PSP2	P50109	593 aa	Known RBP	2.57	□□□□□ -2
NIP100	YPL174C	SRP1	Q02821	542 aa	Known RBP	2.57	□□□□□ -2
NIP100	YPL174C	RPL11A	P0C0W9	174 aa	Known RBP	2.57	□□□□□ -2
NIP100	YPL174C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	2.57	□□□□□ -2	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms