RNA–Protein interactions for RNA: YPL083C

SEN54, Transcript of Subunit of the tRNA splicing endonuclease, yeast

Gene SEN54, Length 1,404 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEN54	YPL083C	YOR352W	Q08816	343 aa		4.22	□□□□□ -1.73
SEN54	YPL083C	CYC1	P00044	109 aa	Predicted RBP	4.21	□□□□□ -1.73
SEN54	YPL083C	ALG3	P38179	458 aa		4.21	□□□□□ -1.73
SEN54	YPL083C	FAA3	P39002	694 aa		4.21	□□□□□ -1.73
SEN54	YPL083C	STE11	P23561	717 aa		4.21	□□□□□ -1.74
SEN54	YPL083C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
SEN54	YPL083C	PLB2	Q03674	706 aa		4.21	□□□□□ -1.74
SEN54	YPL083C	TAD3	Q9URQ3	322 aa		4.21	□□□□□ -1.74
SEN54	YPL083C	GPB2	P39717	880 aa		4.2	□□□□□ -1.74
SEN54	YPL083C	RSB1	Q08417	382 aa		4.2	□□□□□ -1.74
SEN54	YPL083C	PNS1	Q12412	539 aa		4.2	□□□□□ -1.74
SEN54	YPL083C	WHI5	Q12416	295 aa		4.2	□□□□□ -1.74
SEN54	YPL083C	CDC6	P09119	513 aa		4.19	□□□□□ -1.74
SEN54	YPL083C	CDC20	P26309	610 aa		4.19	□□□□□ -1.74
SEN54	YPL083C	TRM2	P33753	639 aa		4.19	□□□□□ -1.74
SEN54	YPL083C	SIW14	P53965	281 aa		4.19	□□□□□ -1.74
SEN54	YPL083C	PUS9	Q12069	462 aa		4.19	□□□□□ -1.74
SEN54	YPL083C	MCD1	Q12158	566 aa		4.19	□□□□□ -1.74
SEN54	YPL083C	SPO21	Q12411	609 aa		4.19	□□□□□ -1.74
SEN54	YPL083C	SRM1	P21827	482 aa		4.18	□□□□□ -1.74
SEN54	YPL083C	RGD1	P38339	666 aa		4.18	□□□□□ -1.74
SEN54	YPL083C	NOP7	P53261	605 aa	Known RBP	4.18	□□□□□ -1.74
SEN54	YPL083C	RSM24	Q03976	319 aa		4.18	□□□□□ -1.74
SEN54	YPL083C	SIZ1	Q04195	904 aa		4.18	□□□□□ -1.74
SEN54	YPL083C	NAP1	P25293	417 aa	Known RBP	4.17	□□□□□ -1.74
SEN54	YPL083C	GNP1	P48813	663 aa		4.17	□□□□□ -1.74
SEN54	YPL083C	YGR122W	P53272	402 aa		4.17	□□□□□ -1.74
SEN54	YPL083C	ROT1	Q03691	256 aa		4.17	□□□□□ -1.74
SEN54	YPL083C	ATG13	Q06628	738 aa		4.17	□□□□□ -1.74
SEN54	YPL083C	ACK1	Q07622	623 aa	Predicted RBP	4.17	□□□□□ -1.74
SEN54	YPL083C	NOP8	Q08287	484 aa	Predicted RBP	4.17	□□□□□ -1.74
SEN54	YPL083C	RIB2	Q12362	591 aa	Known RBP	4.17	□□□□□ -1.74
SEN54	YPL083C	GAL10	P04397	699 aa		4.16	□□□□□ -1.74
SEN54	YPL083C	PRE9	P23638	258 aa	Known RBP	4.16	□□□□□ -1.74
SEN54	YPL083C	SEC20	P28791	383 aa		4.16	□□□□□ -1.74
SEN54	YPL083C	MKK2	P32491	506 aa		4.16	□□□□□ -1.74
SEN54	YPL083C	RFC5	P38251	354 aa		4.16	□□□□□ -1.74
SEN54	YPL083C	HXT13	P39924	564 aa		4.16	□□□□□ -1.74
SEN54	YPL083C	MNN10	P50108	393 aa	Known RBP	4.16	□□□□□ -1.74
SEN54	YPL083C	VPS62	P53285	467 aa		4.16	□□□□□ -1.74
SEN54	YPL083C	PBP1	P53297	722 aa	Known RBP	4.16	□□□□□ -1.74
SEN54	YPL083C	HXT17	P53631	564 aa		4.16	□□□□□ -1.74
SEN54	YPL083C	HXT15	P54854	567 aa		4.16	□□□□□ -1.74
SEN54	YPL083C	URN1	Q06525	465 aa	Known RBP	4.16	□□□□□ -1.74
SEN54	YPL083C	RXT3	Q07458	294 aa		4.16	□□□□□ -1.74
SEN54	YPL083C	RPT1	P33299	467 aa	Known RBP	4.15	□□□□□ -1.74
SEN54	YPL083C	LST4	P34239	828 aa		4.15	□□□□□ -1.74
SEN54	YPL083C	RAT1	Q02792	1006 aa	Known RBP	4.15	□□□□□ -1.74
SEN54	YPL083C	ROD1	Q02805	837 aa		4.15	□□□□□ -1.74
SEN54	YPL083C	IOC4	Q04213	475 aa		4.15	□□□□□ -1.74
SEN54	YPL083C	GPB1	Q08886	897 aa		4.15	□□□□□ -1.74
SEN54	YPL083C	KIN2	P13186	1147 aa	Known RBP	4.14	□□□□□ -1.75
SEN54	YPL083C	MRPS18	P42847	217 aa		4.14	□□□□□ -1.75
SEN54	YPL083C	MSE1	P48525	536 aa		4.14	□□□□□ -1.75
SEN54	YPL083C	SLI1	P53304	468 aa		4.14	□□□□□ -1.75
SEN54	YPL083C	ORC1	P54784	914 aa	Predicted RBP	4.14	□□□□□ -1.75
SEN54	YPL083C	DED1	P06634	604 aa	Known RBP	4.13	□□□□□ -1.75
SEN54	YPL083C	CMP2	P14747	604 aa		4.13	□□□□□ -1.75
SEN54	YPL083C	HCM1	P25364	564 aa		4.13	□□□□□ -1.75
SEN54	YPL083C	PMI40	P29952	429 aa	Known RBP	4.13	□□□□□ -1.75
SEN54	YPL083C	SEC8	P32855	1065 aa		4.13	□□□□□ -1.75
SEN54	YPL083C	NTO1	Q12311	748 aa		4.13	□□□□□ -1.75
SEN54	YPL083C	YER152C	P10356	443 aa		4.12	□□□□□ -1.75
SEN54	YPL083C	SLD2	P34252	453 aa		4.12	□□□□□ -1.75
SEN54	YPL083C	YFL054C	P43549	646 aa		4.12	□□□□□ -1.75
SEN54	YPL083C	CNN1	P43618	361 aa		4.12	□□□□□ -1.75
SEN54	YPL083C	SVS1	Q12254	260 aa		4.12	□□□□□ -1.75
SEN54	YPL083C	RAD2	P07276	1031 aa		4.12	□□□□□ -1.75
SEN54	YPL083C	DBP5	P20449	482 aa	Known RBP	4.12	□□□□□ -1.75
SEN54	YPL083C	SYP1	P25623	870 aa	Known RBP	4.12	□□□□□ -1.75
SEN54	YPL083C	THI12	P42883	340 aa		4.12	□□□□□ -1.75
SEN54	YPL083C	THI5	P43534	340 aa		4.12	□□□□□ -1.75
SEN54	YPL083C	THI11	P47183	340 aa		4.12	□□□□□ -1.75
SEN54	YPL083C	MCM6	P53091	1017 aa	Known RBP	4.12	□□□□□ -1.75
SEN54	YPL083C	THI13	Q07748	340 aa		4.12	□□□□□ -1.75
SEN54	YPL083C	PMA1	P05030	918 aa	Known RBP	4.11	□□□□□ -1.75
SEN54	YPL083C	CYC8	P14922	966 aa		4.11	□□□□□ -1.75
SEN54	YPL083C	DCG1	P32460	244 aa		4.11	□□□□□ -1.75
SEN54	YPL083C	CHS7	P38843	316 aa		4.11	□□□□□ -1.75
SEN54	YPL083C	MPH1	P40562	993 aa		4.11	□□□□□ -1.75
SEN54	YPL083C	MSC2	Q03455	724 aa		4.11	□□□□□ -1.75
SEN54	YPL083C	YLR224W	Q05947	369 aa		4.11	□□□□□ -1.75
SEN54	YPL083C	TMA10	Q06177	86 aa		4.11	□□□□□ -1.75
SEN54	YPL083C	HMI1	Q12039	706 aa		4.11	□□□□□ -1.75
SEN54	YPL083C	SUN4	P53616	420 aa		4.1	□□□□□ -1.75
SEN54	YPL083C	CTF4	Q01454	927 aa		4.1	□□□□□ -1.75
SEN54	YPL083C	NOP12	Q08208	459 aa	Known RBP	4.1	□□□□□ -1.75
SEN54	YPL083C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
SEN54	YPL083C	ACE2	P21192	770 aa		4.09	□□□□□ -1.75
SEN54	YPL083C	APL1	P27351	700 aa		4.09	□□□□□ -1.75
SEN54	YPL083C	MLS1	P30952	554 aa		4.09	□□□□□ -1.75
SEN54	YPL083C	RRT14	P40470	206 aa		4.09	□□□□□ -1.75
SEN54	YPL083C	SNU71	P53207	620 aa	Known RBP	4.09	□□□□□ -1.75
SEN54	YPL083C	YAP6	Q03935	383 aa		4.09	□□□□□ -1.75
SEN54	YPL083C	BAS1	P22035	811 aa		4.08	□□□□□ -1.76
SEN54	YPL083C	EMC1	P25574	760 aa		4.08	□□□□□ -1.76
SEN54	YPL083C	YPT53	P36019	220 aa		4.08	□□□□□ -1.76
SEN54	YPL083C	MET10	P39692	1035 aa		4.08	□□□□□ -1.76
SEN54	YPL083C	AIM21	P40563	679 aa		4.08	□□□□□ -1.76
SEN54	YPL083C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms