RNA–Protein interactions for RNA: YPL030W

TRM44, Transcript of tRNA(Ser) Um(44) 2'-O-methyltransferase, yeast

Gene TRM44, Length 1,704 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM44	YPL030W	MID1	P41821	548 aa		4.8	□□□□□ -1.64
TRM44	YPL030W	GCN20	P43535	752 aa	Known RBP	4.8	□□□□□ -1.64
TRM44	YPL030W	URB2	P47108	1174 aa		4.8	□□□□□ -1.64
TRM44	YPL030W	ILM1	P47155	203 aa		4.8	□□□□□ -1.64
TRM44	YPL030W	SDA1	P53313	767 aa	Known RBP	4.8	□□□□□ -1.64
TRM44	YPL030W	FYV6	P53913	173 aa		4.8	□□□□□ -1.64
TRM44	YPL030W	PEX29	Q03370	554 aa		4.8	□□□□□ -1.64
TRM44	YPL030W	PLP1	Q04004	230 aa		4.8	□□□□□ -1.64
TRM44	YPL030W	EIS1	Q05050	843 aa	Known RBP	4.8	□□□□□ -1.64
TRM44	YPL030W	MMR1	Q06324	491 aa		4.8	□□□□□ -1.64
TRM44	YPL030W	OPY2	Q06810	360 aa		4.8	□□□□□ -1.64
TRM44	YPL030W	BRX1	Q08235	291 aa	Known RBP	4.8	□□□□□ -1.64
TRM44	YPL030W	ICL2	Q12031	575 aa		4.8	□□□□□ -1.64
TRM44	YPL030W	TAF3	Q12297	353 aa		4.8	□□□□□ -1.64
TRM44	YPL030W	SIN3	P22579	1536 aa		4.8	□□□□□ -1.64
TRM44	YPL030W	ADH4	P10127	382 aa		4.79	□□□□□ -1.64
TRM44	YPL030W	RPP1B	P10622	106 aa	Known RBP	4.79	□□□□□ -1.64
TRM44	YPL030W	NMT1	P14743	455 aa		4.79	□□□□□ -1.64
TRM44	YPL030W	MSS116	P15424	664 aa	Known RBP	4.79	□□□□□ -1.64
TRM44	YPL030W	PMA2	P19657	947 aa		4.79	□□□□□ -1.64
TRM44	YPL030W	BMH1	P29311	267 aa	Known RBP	4.79	□□□□□ -1.64
TRM44	YPL030W	ITR2	P30606	609 aa		4.79	□□□□□ -1.64
TRM44	YPL030W	MXR1	P40029	184 aa		4.79	□□□□□ -1.64
TRM44	YPL030W	RAD17	P48581	401 aa		4.79	□□□□□ -1.64
TRM44	YPL030W	CWC15	Q03772	175 aa	Known RBP	4.79	□□□□□ -1.64
TRM44	YPL030W	SVF1	Q05515	481 aa		4.79	□□□□□ -1.64
TRM44	YPL030W	CRN1	Q06440	651 aa		4.79	□□□□□ -1.64
TRM44	YPL030W	MDM36	Q06820	579 aa		4.79	□□□□□ -1.64
TRM44	YPL030W	TLG2	Q08144	397 aa		4.79	□□□□□ -1.64
TRM44	YPL030W	NOB1	Q08444	459 aa	Known RBP	4.79	□□□□□ -1.64
TRM44	YPL030W	TRM8	Q12009	286 aa		4.79	□□□□□ -1.64
TRM44	YPL030W	GNT1	Q12096	491 aa		4.79	□□□□□ -1.64
TRM44	YPL030W	OSH2	Q12451	1283 aa		4.79	□□□□□ -1.64
TRM44	YPL030W	YKL068W-A	Q3E826	78 aa		4.79	□□□□□ -1.64
TRM44	YPL030W	MET5	P47169	1442 aa		4.79	□□□□□ -1.64
TRM44	YPL030W	YAP1	P19880	650 aa	Known RBP	4.78	□□□□□ -1.64
TRM44	YPL030W	CLB4	P24871	460 aa		4.78	□□□□□ -1.64
TRM44	YPL030W	TSR4	P25040	408 aa		4.78	□□□□□ -1.64
TRM44	YPL030W	KRR1	P25586	316 aa	Predicted RBP	4.78	□□□□□ -1.64
TRM44	YPL030W	ECM32	P32644	1121 aa	Known RBP	4.78	□□□□□ -1.64
TRM44	YPL030W	STE13	P33894	931 aa		4.78	□□□□□ -1.64
TRM44	YPL030W	YHR020W	P38708	688 aa	Known RBP	4.78	□□□□□ -1.64
TRM44	YPL030W	NUP60	P39705	539 aa		4.78	□□□□□ -1.64
TRM44	YPL030W	MVP1	P40959	511 aa	Known RBP	4.78	□□□□□ -1.64
TRM44	YPL030W	SAP155	P43612	1002 aa		4.78	□□□□□ -1.64
TRM44	YPL030W	ALD4	P46367	519 aa	Known RBP	4.78	□□□□□ -1.64
TRM44	YPL030W	SSL2	Q00578	843 aa		4.78	□□□□□ -1.64
TRM44	YPL030W	DML1	Q03652	475 aa		4.78	□□□□□ -1.64
TRM44	YPL030W	GIC2	Q06648	383 aa		4.78	□□□□□ -1.64
TRM44	YPL030W	GRC3	Q07845	632 aa		4.78	□□□□□ -1.64
TRM44	YPL030W	IES3	Q12345	250 aa		4.78	□□□□□ -1.64
TRM44	YPL030W	SSM4	P40318	1319 aa		4.78	□□□□□ -1.64
TRM44	YPL030W	TOM70	P07213	617 aa	Known RBP	4.77	□□□□□ -1.65
TRM44	YPL030W	CDC16	P09798	840 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	SSB1	P11484	613 aa	Known RBP	4.77	□□□□□ -1.65
TRM44	YPL030W	TUP1	P16649	713 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	SUI2	P20459	304 aa	Known RBP	4.77	□□□□□ -1.65
TRM44	YPL030W	SIT4	P20604	311 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	CDC60	P26637	1090 aa	Known RBP	4.77	□□□□□ -1.65
TRM44	YPL030W	ITR1	P30605	584 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	SEC21	P32074	935 aa	Known RBP	4.77	□□□□□ -1.65
TRM44	YPL030W	UBC6	P33296	250 aa	Predicted RBP	4.77	□□□□□ -1.65
TRM44	YPL030W	DUR3	P33413	735 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	HCS1	P34243	683 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	MNR2	P35724	969 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	TTI1	P36097	1038 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	YKR018C	P36114	725 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	YSW1	P38280	609 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	APD1	P38281	316 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	SSB2	P40150	613 aa	Known RBP	4.77	□□□□□ -1.65
TRM44	YPL030W	GCD10	P41814	478 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	ALB1	P47019	175 aa	Predicted RBP	4.77	□□□□□ -1.65
TRM44	YPL030W	APS3	P47064	194 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	ECL1	P48235	211 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	TRF5	P48561	642 aa	Known RBP	4.77	□□□□□ -1.65
TRM44	YPL030W	ALT1	P52893	592 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	HST1	P53685	503 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	TFB3	Q03290	321 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	RPN4	Q03465	531 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	MTC5	Q03897	1148 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	RAD33	Q04231	177 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	DYN3	Q04949	312 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	SWA2	Q06677	668 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	YOL057W	Q08225	711 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	ATP16	Q12165	160 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	MED4	Q12343	284 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	RPC53	P25441	422 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	VPH2	P32341	215 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	AFR1	P33304	620 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	YKL100C	P34248	587 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	JNM1	P36224	373 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	GRX7	P38068	203 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	YBL028C	P38202	106 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	RXT2	P38255	430 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	YHL012W	P38709	493 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	PIH1	P38768	344 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	RGA1	P39083	1007 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	MTW1	P39731	289 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	ATG3	P40344	310 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	ZDS2	P54786	942 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms