RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRL1	YOR247W	TSR4	P25040	408 aa		4.25	□□□□□ -1.73
SRL1	YOR247W	CDC11	P32458	415 aa		4.25	□□□□□ -1.73
SRL1	YOR247W	SFA1	P32771	386 aa		4.25	□□□□□ -1.73
SRL1	YOR247W	MOT2	P34909	587 aa	Known RBP	4.25	□□□□□ -1.73
SRL1	YOR247W	RGD1	P38339	666 aa		4.25	□□□□□ -1.73
SRL1	YOR247W	RRM3	P38766	723 aa		4.25	□□□□□ -1.73
SRL1	YOR247W	ALR2	P43553	858 aa		4.25	□□□□□ -1.73
SRL1	YOR247W	YGL176C	P46945	554 aa		4.25	□□□□□ -1.73
SRL1	YOR247W	VPS53	P47061	822 aa		4.25	□□□□□ -1.73
SRL1	YOR247W	CCT8	P47079	568 aa	Known RBP	4.25	□□□□□ -1.73
SRL1	YOR247W	YNR063W	P53749	607 aa		4.25	□□□□□ -1.73
SRL1	YOR247W	ESC2	Q06340	456 aa		4.25	□□□□□ -1.73
SRL1	YOR247W	YDL124W	Q07551	312 aa	Known RBP	4.25	□□□□□ -1.73
SRL1	YOR247W	AVO1	Q08236	1176 aa		4.25	□□□□□ -1.73
SRL1	YOR247W	TY4B-P	A0A0B7P3V8	1104 aa		4.24	□□□□□ -1.73
SRL1	YOR247W	PAN5	P38787	379 aa		4.24	□□□□□ -1.73
SRL1	YOR247W	YAR028W	P39548	234 aa		4.24	□□□□□ -1.73
SRL1	YOR247W	GEM1	P39722	662 aa		4.24	□□□□□ -1.73
SRL1	YOR247W	PFD1	P46988	109 aa		4.24	□□□□□ -1.73
SRL1	YOR247W	BUD9	P53226	547 aa		4.24	□□□□□ -1.73
SRL1	YOR247W	RAT1	Q02792	1006 aa	Known RBP	4.24	□□□□□ -1.73
SRL1	YOR247W	YMR074C	Q04773	145 aa		4.24	□□□□□ -1.73
SRL1	YOR247W	PTC5	Q12511	572 aa		4.24	□□□□□ -1.73
SRL1	YOR247W	TY4A-H	Q6Q5P6	413 aa		4.24	□□□□□ -1.73
SRL1	YOR247W	AI3	P03877	415 aa		4.23	□□□□□ -1.73
SRL1	YOR247W	YCK2	P23292	546 aa	Known RBP	4.23	□□□□□ -1.73
SRL1	YOR247W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
SRL1	YOR247W	SFP1	P32432	683 aa		4.23	□□□□□ -1.73
SRL1	YOR247W	TOM20	P35180	183 aa		4.23	□□□□□ -1.73
SRL1	YOR247W	ALG3	P38179	458 aa		4.23	□□□□□ -1.73
SRL1	YOR247W	TED1	P40533	473 aa		4.23	□□□□□ -1.73
SRL1	YOR247W	PRY1	P47032	299 aa		4.23	□□□□□ -1.73
SRL1	YOR247W	TAF8	Q03750	510 aa		4.23	□□□□□ -1.73
SRL1	YOR247W	AOS1	Q06624	347 aa		4.23	□□□□□ -1.73
SRL1	YOR247W	GNT1	Q12096	491 aa		4.23	□□□□□ -1.73
SRL1	YOR247W	ERR1	P0CX10	437 aa		4.22	□□□□□ -1.73
SRL1	YOR247W	ERR2	P0CX11	437 aa		4.22	□□□□□ -1.73
SRL1	YOR247W	RSC6	P25632	483 aa		4.22	□□□□□ -1.73
SRL1	YOR247W	MLS1	P30952	554 aa		4.22	□□□□□ -1.73
SRL1	YOR247W	MAE1	P36013	669 aa	Known RBP	4.22	□□□□□ -1.73
SRL1	YOR247W	MBP1	P39678	833 aa		4.22	□□□□□ -1.73
SRL1	YOR247W	SLN1	P39928	1220 aa	Predicted RBP	4.22	□□□□□ -1.73
SRL1	YOR247W	POL5	P39985	1022 aa	Known RBP	4.22	□□□□□ -1.73
SRL1	YOR247W	MPH1	P40562	993 aa		4.22	□□□□□ -1.73
SRL1	YOR247W	SPO74	P45819	413 aa		4.22	□□□□□ -1.73
SRL1	YOR247W	YJR142W	P47173	342 aa		4.22	□□□□□ -1.73
SRL1	YOR247W	ARI1	P53111	347 aa	Known RBP	4.22	□□□□□ -1.73
SRL1	YOR247W	SPP382	Q06411	708 aa	Predicted RBP	4.22	□□□□□ -1.73
SRL1	YOR247W	UBX5	Q06682	500 aa		4.22	□□□□□ -1.73
SRL1	YOR247W	YPL260W	Q08977	551 aa		4.22	□□□□□ -1.73
SRL1	YOR247W	ELG1	Q12050	791 aa		4.22	□□□□□ -1.73
SRL1	YOR247W	NOP14	Q99207	810 aa	Known RBP	4.22	□□□□□ -1.73
SRL1	YOR247W	SSB1	P11484	613 aa	Known RBP	4.21	□□□□□ -1.74
SRL1	YOR247W	SRM1	P21827	482 aa		4.21	□□□□□ -1.74
SRL1	YOR247W	NFS1	P25374	497 aa		4.21	□□□□□ -1.74
SRL1	YOR247W	MSH2	P25847	964 aa		4.21	□□□□□ -1.74
SRL1	YOR247W	AFG2	P32794	780 aa		4.21	□□□□□ -1.74
SRL1	YOR247W	CCC2	P38995	1004 aa		4.21	□□□□□ -1.74
SRL1	YOR247W	SSB2	P40150	613 aa	Known RBP	4.21	□□□□□ -1.74
SRL1	YOR247W	UGO1	Q03327	502 aa		4.21	□□□□□ -1.74
SRL1	YOR247W	AAR2	P32357	355 aa	Predicted RBP	4.2	□□□□□ -1.74
SRL1	YOR247W	CRP1	P38845	465 aa	Known RBP	4.2	□□□□□ -1.74
SRL1	YOR247W	HSV2	P50079	448 aa	Predicted RBP	4.2	□□□□□ -1.74
SRL1	YOR247W	YGR045C	P53229	120 aa		4.2	□□□□□ -1.74
SRL1	YOR247W	YPL034W	Q03083	165 aa		4.2	□□□□□ -1.74
SRL1	YOR247W	YPL066W	Q12194	479 aa		4.2	□□□□□ -1.74
SRL1	YOR247W	TOM70	P07213	617 aa	Known RBP	4.19	□□□□□ -1.74
SRL1	YOR247W	GRX4	P32642	244 aa		4.19	□□□□□ -1.74
SRL1	YOR247W	DOM34	P33309	386 aa		4.19	□□□□□ -1.74
SRL1	YOR247W	NNK1	P36003	928 aa		4.19	□□□□□ -1.74
SRL1	YOR247W	QNS1	P38795	714 aa	Known RBP	4.19	□□□□□ -1.74
SRL1	YOR247W	RTA1	P53047	317 aa		4.19	□□□□□ -1.74
SRL1	YOR247W	DNM1	P54861	757 aa		4.19	□□□□□ -1.74
SRL1	YOR247W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
SRL1	YOR247W	YDR306C	Q06640	478 aa		4.19	□□□□□ -1.74
SRL1	YOR247W	GIC2	Q06648	383 aa		4.19	□□□□□ -1.74
SRL1	YOR247W	MCA1	Q08601	432 aa		4.19	□□□□□ -1.74
SRL1	YOR247W	ALG6	Q12001	544 aa	Known RBP	4.19	□□□□□ -1.74
SRL1	YOR247W	YOR223W	Q12015	292 aa		4.19	□□□□□ -1.74
SRL1	YOR247W	TY1A-NL1	Q12391	440 aa	Known RBP	4.19	□□□□□ -1.74
SRL1	YOR247W	HBN1	Q96VH4	193 aa		4.19	□□□□□ -1.74
SRL1	YOR247W	ADE8	P04161	214 aa		4.18	□□□□□ -1.74
SRL1	YOR247W	RET1	P22276	1149 aa	Known RBP	4.18	□□□□□ -1.74
SRL1	YOR247W	PPH3	P32345	308 aa		4.18	□□□□□ -1.74
SRL1	YOR247W	COQ2	P32378	372 aa		4.18	□□□□□ -1.74
SRL1	YOR247W	PEX6	P33760	1030 aa		4.18	□□□□□ -1.74
SRL1	YOR247W	UBP12	P39538	1254 aa		4.18	□□□□□ -1.74
SRL1	YOR247W	GDH3	P39708	457 aa		4.18	□□□□□ -1.74
SRL1	YOR247W	ELA1	P53861	379 aa	Predicted RBP	4.18	□□□□□ -1.74
SRL1	YOR247W	SRP1	Q02821	542 aa	Known RBP	4.18	□□□□□ -1.74
SRL1	YOR247W	RSA3	Q05942	220 aa	Known RBP	4.18	□□□□□ -1.74
SRL1	YOR247W	GAS5	Q08193	484 aa		4.18	□□□□□ -1.74
SRL1	YOR247W	NTG2	Q08214	380 aa		4.18	□□□□□ -1.74
SRL1	YOR247W	ERS1	P17261	260 aa		4.17	□□□□□ -1.74
SRL1	YOR247W	GSY1	P23337	708 aa		4.17	□□□□□ -1.74
SRL1	YOR247W	HBS1	P32769	611 aa	Known RBP	4.17	□□□□□ -1.74
SRL1	YOR247W	BET3	P36149	193 aa		4.17	□□□□□ -1.74
SRL1	YOR247W	SIP5	P40210	489 aa	Known RBP	4.17	□□□□□ -1.74
SRL1	YOR247W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
SRL1	YOR247W	KIP3	P53086	805 aa	Known RBP	4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms