RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W PCL8Q08966 492 aa4.38□□□□□ -1.71
ROD1YOR018W YPL150WQ12152 901 aa4.38□□□□□ -1.71
ROD1YOR018W TPM1P17536 199 aaKnown RBP4.38□□□□□ -1.71
ROD1YOR018W RTG1P32607 177 aa4.38□□□□□ -1.71
ROD1YOR018W SEC61P32915 480 aa4.38□□□□□ -1.71
ROD1YOR018W NPL4P33755 580 aa4.38□□□□□ -1.71
ROD1YOR018W SHP1P34223 423 aa4.38□□□□□ -1.71
ROD1YOR018W ISM1P48526 1002 aa4.38□□□□□ -1.71
ROD1YOR018W FOL1P53848 824 aa4.38□□□□□ -1.71
ROD1YOR018W EIS1Q05050 843 aaKnown RBP4.38□□□□□ -1.71
ROD1YOR018W UTP4Q06679 776 aaKnown RBP4.38□□□□□ -1.71
ROD1YOR018W OXR1Q08952 273 aa4.38□□□□□ -1.71
ROD1YOR018W LSP1Q12230 341 aaKnown RBP4.38□□□□□ -1.71
ROD1YOR018W PTC5Q12511 572 aa4.38□□□□□ -1.71
ROD1YOR018W CSR2Q12734 1121 aa4.38□□□□□ -1.71
ROD1YOR018W NUC1P08466 329 aa4.37□□□□□ -1.71
ROD1YOR018W RGP1P16664 663 aa4.37□□□□□ -1.71
ROD1YOR018W RNR3P21672 869 aaKnown RBP4.37□□□□□ -1.71
ROD1YOR018W SPT5P27692 1063 aaKnown RBP4.37□□□□□ -1.71
ROD1YOR018W RXT2P38255 430 aa4.37□□□□□ -1.71
ROD1YOR018W BDH2P39713 417 aa4.37□□□□□ -1.71
ROD1YOR018W RVS167P39743 482 aaKnown RBP4.37□□□□□ -1.71
ROD1YOR018W SNF7P39929 240 aaKnown RBP4.37□□□□□ -1.71
ROD1YOR018W FYV10P40492 516 aa4.37□□□□□ -1.71
ROD1YOR018W RPL34BP40525 121 aaKnown RBP4.37□□□□□ -1.71
ROD1YOR018W SMD2Q06217 110 aaKnown RBP4.37□□□□□ -1.71
ROD1YOR018W YPR084WQ06821 456 aa4.37□□□□□ -1.71
ROD1YOR018W URA1P28272 314 aaPredicted RBP4.37□□□□□ -1.71
ROD1YOR018W TGL4P36165 910 aa4.37□□□□□ -1.71
ROD1YOR018W ARL1P38116 183 aaKnown RBP4.37□□□□□ -1.71
ROD1YOR018W MAL31P38156 614 aa4.37□□□□□ -1.71
ROD1YOR018W YHL017WP38745 532 aa4.37□□□□□ -1.71
ROD1YOR018W ACA1P39970 489 aa4.37□□□□□ -1.71
ROD1YOR018W PEA2P40091 420 aa4.37□□□□□ -1.71
ROD1YOR018W PIL1P53252 339 aaKnown RBP4.37□□□□□ -1.71
ROD1YOR018W YDR341CQ05506 607 aaKnown RBP4.37□□□□□ -1.71
ROD1YOR018W DSE3Q08729 430 aa4.37□□□□□ -1.71
ROD1YOR018W PHR1P05066 565 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
ROD1YOR018W SAM1P10659 382 aaKnown RBP4.36□□□□□ -1.71
ROD1YOR018W CST26P38226 397 aa4.36□□□□□ -1.71
ROD1YOR018W CIT3P43635 486 aa4.36□□□□□ -1.71
ROD1YOR018W YGL039WP53183 348 aaKnown RBP4.36□□□□□ -1.71
ROD1YOR018W HST1P53685 503 aa4.36□□□□□ -1.71
ROD1YOR018W NAF1P53919 492 aaKnown RBP4.36□□□□□ -1.71
ROD1YOR018W MDM1Q01846 1127 aa4.36□□□□□ -1.71
ROD1YOR018W AIM33Q04516 312 aa4.36□□□□□ -1.71
ROD1YOR018W GET3Q12154 354 aaKnown RBP4.36□□□□□ -1.71
ROD1YOR018W YPR015CQ12531 247 aa4.36□□□□□ -1.71
ROD1YOR018W TUS1Q06412 1307 aa4.36□□□□□ -1.71
ROD1YOR018W CIT1P00890 479 aa4.36□□□□□ -1.71
ROD1YOR018W GPA1P08539 472 aa4.36□□□□□ -1.71
ROD1YOR018W TIF4631P39935 952 aaKnown RBP4.36□□□□□ -1.71
ROD1YOR018W YER130CP39959 443 aa4.36□□□□□ -1.71
ROD1YOR018W YIL089WP40500 205 aa4.36□□□□□ -1.71
ROD1YOR018W EAF7P53911 425 aaKnown RBP4.36□□□□□ -1.71
ROD1YOR018W KRE33P53914 1056 aaKnown RBP4.36□□□□□ -1.71
ROD1YOR018W HAP5Q02516 242 aa4.36□□□□□ -1.71
ROD1YOR018W MCM16Q12262 181 aa4.36□□□□□ -1.71
ROD1YOR018W TUB4P53378 473 aa4.35□□□□□ -1.71
ROD1YOR018W TRS120Q04183 1289 aa4.35□□□□□ -1.71
ROD1YOR018W TMA64Q04600 565 aaKnown RBP4.35□□□□□ -1.71
ROD1YOR018W SRP40P32583 406 aaPredicted RBP4.35□□□□□ -1.71
ROD1YOR018W BMH2P34730 273 aaKnown RBP4.35□□□□□ -1.71
ROD1YOR018W PEX14P53112 341 aa4.35□□□□□ -1.71
ROD1YOR018W YGL138CP53122 345 aa4.35□□□□□ -1.71
ROD1YOR018W BUD20Q08004 166 aaPredicted RBP4.35□□□□□ -1.71
ROD1YOR018W HXK1P04806 485 aaKnown RBP4.34□□□□□ -1.71
ROD1YOR018W ISF1P32488 338 aa4.34□□□□□ -1.71
ROD1YOR018W IXR1P33417 597 aa4.34□□□□□ -1.71
ROD1YOR018W PHO88P38264 188 aaPredicted RBP4.34□□□□□ -1.71
ROD1YOR018W TPS3P38426 1054 aaKnown RBP4.34□□□□□ -1.71
ROD1YOR018W ULP2P40537 1034 aaPredicted RBP4.34□□□□□ -1.71
ROD1YOR018W YML037CQ03703 340 aa4.34□□□□□ -1.71
ROD1YOR018W CWC15Q03772 175 aaKnown RBP4.34□□□□□ -1.71
ROD1YOR018W ADY4Q05955 493 aa4.34□□□□□ -1.71
ROD1YOR018W PSR2Q07949 397 aa4.34□□□□□ -1.71
ROD1YOR018W PSK2Q08217 1101 aa4.34□□□□□ -1.71
ROD1YOR018W YPL216WQ08964 1102 aa4.34□□□□□ -1.71
ROD1YOR018W NCR1Q12200 1170 aa4.34□□□□□ -1.71
ROD1YOR018W RKM4Q12504 494 aa4.34□□□□□ -1.71
ROD1YOR018W TUF1P02992 437 aaKnown RBP4.34□□□□□ -1.72
ROD1YOR018W CBP3P21560 335 aa4.34□□□□□ -1.72
ROD1YOR018W RPN12P32496 274 aa4.34□□□□□ -1.72
ROD1YOR018W RKM3P38222 552 aa4.34□□□□□ -1.72
ROD1YOR018W CCT5P40413 562 aaKnown RBP4.34□□□□□ -1.72
ROD1YOR018W FMS1P50264 508 aa4.34□□□□□ -1.72
ROD1YOR018W RSC1P53236 928 aa4.34□□□□□ -1.72
ROD1YOR018W SIS2P36024 562 aa4.33□□□□□ -1.72
ROD1YOR018W VPS45P38932 577 aa4.33□□□□□ -1.72
ROD1YOR018W ARH1P48360 493 aa4.33□□□□□ -1.72
ROD1YOR018W LSC2P53312 427 aa4.33□□□□□ -1.72
ROD1YOR018W DIP5P53388 608 aa4.33□□□□□ -1.72
ROD1YOR018W UBX5Q06682 500 aa4.33□□□□□ -1.72
ROD1YOR018W YOL075CQ08234 1294 aa4.33□□□□□ -1.72
ROD1YOR018W GIN4Q12263 1142 aa4.33□□□□□ -1.72
ROD1YOR018W RAD18P10862 487 aa4.33□□□□□ -1.72
ROD1YOR018W CLC1P17891 233 aa4.33□□□□□ -1.72
ROD1YOR018W PET10P36139 283 aa4.33□□□□□ -1.72
ROD1YOR018W ERG7P38604 731 aa4.33□□□□□ -1.72
ROD1YOR018W STT3P39007 718 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 57.7 ms