RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W AIM33Q04516 312 aa6.63□□□□□ -1.35
ATG4YNL223W PIB1Q06651 286 aa6.63□□□□□ -1.35
ATG4YNL223W SUB2Q07478 446 aaKnown RBP6.63□□□□□ -1.35
ATG4YNL223W OXR1Q08952 273 aa6.63□□□□□ -1.35
ATG4YNL223W AFT2Q08957 416 aa6.63□□□□□ -1.35
ATG4YNL223W RAD18P10862 487 aa6.62□□□□□ -1.35
ATG4YNL223W PET10P36139 283 aa6.62□□□□□ -1.35
ATG4YNL223W ADE17P38009 592 aaKnown RBP6.62□□□□□ -1.35
ATG4YNL223W PHO88P38264 188 aaPredicted RBP6.62□□□□□ -1.35
ATG4YNL223W SUL1P38359 859 aa6.62□□□□□ -1.35
ATG4YNL223W ERG7P38604 731 aa6.62□□□□□ -1.35
ATG4YNL223W ORC6P38826 435 aa6.62□□□□□ -1.35
ATG4YNL223W GAA1P39012 614 aa6.62□□□□□ -1.35
ATG4YNL223W YML037CQ03703 340 aa6.62□□□□□ -1.35
ATG4YNL223W CWC15Q03772 175 aaKnown RBP6.62□□□□□ -1.35
ATG4YNL223W ADY4Q05955 493 aa6.62□□□□□ -1.35
ATG4YNL223W TMA16Q08687 178 aa6.62□□□□□ -1.35
ATG4YNL223W GIN4Q12263 1142 aa6.62□□□□□ -1.35
ATG4YNL223W FBP1P09201 348 aa6.61□□□□□ -1.35
ATG4YNL223W CKA2P19454 339 aa6.61□□□□□ -1.35
ATG4YNL223W GSY1P23337 708 aa6.61□□□□□ -1.35
ATG4YNL223W DBP1P24784 617 aaKnown RBP6.61□□□□□ -1.35
ATG4YNL223W UGA4P32837 571 aa6.61□□□□□ -1.35
ATG4YNL223W PNT1P38969 423 aa6.61□□□□□ -1.35
ATG4YNL223W VHR2P40041 505 aa6.61□□□□□ -1.35
ATG4YNL223W VTC2P43585 828 aa6.61□□□□□ -1.35
ATG4YNL223W YGR237CP50089 785 aa6.61□□□□□ -1.35
ATG4YNL223W CBK1P53894 756 aa6.61□□□□□ -1.35
ATG4YNL223W MFM1Q02783 413 aa6.61□□□□□ -1.35
ATG4YNL223W BUL2Q03758 920 aaKnown RBP6.61□□□□□ -1.35
ATG4YNL223W GFD1Q04839 188 aaKnown RBP6.61□□□□□ -1.35
ATG4YNL223W PHR1P05066 565 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
ATG4YNL223W YEL076C-AP0CX16 216 aa6.6□□□□□ -1.35
ATG4YNL223W YLR464WP0CX17 216 aa6.6□□□□□ -1.35
ATG4YNL223W CYC8P14922 966 aa6.6□□□□□ -1.35
ATG4YNL223W ISY1P21374 235 aaPredicted RBP6.6□□□□□ -1.35
ATG4YNL223W TGL1P34163 548 aa6.6□□□□□ -1.35
ATG4YNL223W OCT1P35999 772 aa6.6□□□□□ -1.35
ATG4YNL223W EBP2P36049 427 aaKnown RBP6.6□□□□□ -1.35
ATG4YNL223W ISW1P38144 1129 aa6.6□□□□□ -1.35
ATG4YNL223W BCD1P38772 366 aa6.6□□□□□ -1.35
ATG4YNL223W YEL076CP39971 216 aa6.6□□□□□ -1.35
ATG4YNL223W VNX1P42839 908 aa6.6□□□□□ -1.35
ATG4YNL223W YJL007CP47080 104 aa6.6□□□□□ -1.35
ATG4YNL223W LSC2P53312 427 aa6.6□□□□□ -1.35
ATG4YNL223W PEX29Q03370 554 aa6.6□□□□□ -1.35
ATG4YNL223W OYE2Q03558 400 aaKnown RBP6.6□□□□□ -1.35
ATG4YNL223W TMA64Q04600 565 aaKnown RBP6.6□□□□□ -1.35
ATG4YNL223W HCR1Q05775 265 aaKnown RBP6.6□□□□□ -1.35
ATG4YNL223W ARP6Q12509 438 aa6.6□□□□□ -1.35
ATG4YNL223W SMC6Q12749 1114 aa6.6□□□□□ -1.35
ATG4YNL223W FKS1P38631 1876 aaKnown RBP6.6□□□□□ -1.35
ATG4YNL223W ILV1P00927 576 aaKnown RBP6.6□□□□□ -1.35
ATG4YNL223W MIP1P15801 1254 aa6.6□□□□□ -1.35
ATG4YNL223W YDJ1P25491 409 aaKnown RBP6.6□□□□□ -1.35
ATG4YNL223W STS1P38637 319 aa6.6□□□□□ -1.35
ATG4YNL223W ROG3P43602 733 aa6.6□□□□□ -1.35
ATG4YNL223W ORC4P54791 529 aa6.6□□□□□ -1.35
ATG4YNL223W SAM1P10659 382 aaKnown RBP6.59□□□□□ -1.36
ATG4YNL223W PER1P25625 357 aa6.59□□□□□ -1.36
ATG4YNL223W BRE2P43132 505 aa6.59□□□□□ -1.36
ATG4YNL223W AIP1P46680 615 aaKnown RBP6.59□□□□□ -1.36
ATG4YNL223W LIF1P53150 421 aa6.59□□□□□ -1.36
ATG4YNL223W ALD6P54115 500 aaKnown RBP6.59□□□□□ -1.36
ATG4YNL223W CTR9P89105 1077 aa6.59□□□□□ -1.36
ATG4YNL223W FUS2Q05670 677 aa6.59□□□□□ -1.36
ATG4YNL223W YLR326WQ06170 240 aaKnown RBP6.59□□□□□ -1.36
ATG4YNL223W SPP382Q06411 708 aaPredicted RBP6.59□□□□□ -1.36
ATG4YNL223W UBX5Q06682 500 aa6.59□□□□□ -1.36
ATG4YNL223W WHI4Q07655 649 aaKnown RBP6.59□□□□□ -1.36
ATG4YNL223W MRC1P25588 1096 aa6.58□□□□□ -1.36
ATG4YNL223W PSO2P30620 661 aa6.58□□□□□ -1.36
ATG4YNL223W YET1P35723 206 aa6.58□□□□□ -1.36
ATG4YNL223W PXL1P36166 706 aa6.58□□□□□ -1.36
ATG4YNL223W YIL089WP40500 205 aa6.58□□□□□ -1.36
ATG4YNL223W RRT6P53117 311 aaPredicted RBP6.58□□□□□ -1.36
ATG4YNL223W VPS75P53853 264 aa6.58□□□□□ -1.36
ATG4YNL223W EBS1Q03466 884 aaKnown RBP6.58□□□□□ -1.36
ATG4YNL223W SPH1Q06160 661 aa6.58□□□□□ -1.36
ATG4YNL223W YLH47Q06493 454 aa6.58□□□□□ -1.36
ATG4YNL223W GUD1Q07729 489 aa6.58□□□□□ -1.36
ATG4YNL223W TLG2Q08144 397 aa6.58□□□□□ -1.36
ATG4YNL223W WSC3Q12215 556 aa6.58□□□□□ -1.36
ATG4YNL223W CDC37P06101 506 aaKnown RBP6.57□□□□□ -1.36
ATG4YNL223W PHO13P19881 312 aa6.57□□□□□ -1.36
ATG4YNL223W UBP11P36026 717 aa6.57□□□□□ -1.36
ATG4YNL223W VAB2P40003 282 aa6.57□□□□□ -1.36
ATG4YNL223W NUP82P40368 713 aa6.57□□□□□ -1.36
ATG4YNL223W STR2P47164 639 aa6.57□□□□□ -1.36
ATG4YNL223W PGA2P53903 129 aa6.57□□□□□ -1.36
ATG4YNL223W YOL075CQ08234 1294 aa6.57□□□□□ -1.36
ATG4YNL223W TYW1Q08960 810 aaKnown RBP6.57□□□□□ -1.36
ATG4YNL223W PDC1P06169 563 aaKnown RBP6.56□□□□□ -1.36
ATG4YNL223W ESS1P22696 170 aa6.56□□□□□ -1.36
ATG4YNL223W SIS1P25294 352 aaKnown RBP6.56□□□□□ -1.36
ATG4YNL223W RAM2P29703 316 aa6.56□□□□□ -1.36
ATG4YNL223W YKL091CP33324 310 aaKnown RBP6.56□□□□□ -1.36
ATG4YNL223W MNR2P35724 969 aa6.56□□□□□ -1.36
ATG4YNL223W SAP190P36123 1033 aa6.56□□□□□ -1.36
ATG4YNL223W SHM1P37292 490 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms