RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C COX6P00427 148 aa2.52□□□□□ -2.01
CSF1YLR087C SCP160P06105 1222 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
CSF1YLR087C PRE9P23638 258 aaKnown RBP2.52□□□□□ -2.01
CSF1YLR087C SSE2P32590 693 aaKnown RBP2.52□□□□□ -2.01
CSF1YLR087C NUP120P35729 1037 aa2.52□□□□□ -2.01
CSF1YLR087C MIA40P36046 403 aa2.52□□□□□ -2.01
CSF1YLR087C KSP1P38691 1029 aaKnown RBP2.52□□□□□ -2.01
CSF1YLR087C FYV6P53913 173 aa2.52□□□□□ -2.01
CSF1YLR087C NUP116Q02630 1113 aa2.52□□□□□ -2.01
CSF1YLR087C ARO10Q06408 635 aa2.52□□□□□ -2.01
CSF1YLR087C GYP5Q12344 894 aa2.52□□□□□ -2.01
CSF1YLR087C LSO2Q3E772 92 aaKnown RBP2.52□□□□□ -2.01
CSF1YLR087C NUP192P47054 1683 aa2.52□□□□□ -2.01
CSF1YLR087C STE3P06783 470 aa2.52□□□□□ -2.01
CSF1YLR087C RFC1P38630 861 aaKnown RBP2.52□□□□□ -2.01
CSF1YLR087C TPO2P53283 614 aa2.52□□□□□ -2.01
CSF1YLR087C CDC31P06704 161 aaKnown RBP2.51□□□□□ -2.01
CSF1YLR087C IME2P32581 645 aa2.51□□□□□ -2.01
CSF1YLR087C HOS3Q02959 697 aaKnown RBP2.51□□□□□ -2.01
CSF1YLR087C RRI2Q12348 645 aa2.51□□□□□ -2.01
CSF1YLR087C MET4P32389 672 aa2.51□□□□□ -2.01
CSF1YLR087C RPN12P32496 274 aa2.51□□□□□ -2.01
CSF1YLR087C ETP1P38748 585 aaKnown RBP2.51□□□□□ -2.01
CSF1YLR087C TIF4632P39936 914 aaKnown RBP2.51□□□□□ -2.01
CSF1YLR087C TPM2P40414 161 aa2.51□□□□□ -2.01
CSF1YLR087C BUD7Q08754 746 aa2.51□□□□□ -2.01
CSF1YLR087C TUB1P09733 447 aaKnown RBP2.51□□□□□ -2.01
CSF1YLR087C RDS1P25611 832 aa2.51□□□□□ -2.01
CSF1YLR087C MRS6P32864 603 aaKnown RBP2.51□□□□□ -2.01
CSF1YLR087C LST4P34239 828 aa2.51□□□□□ -2.01
CSF1YLR087C UTP9P38882 575 aaKnown RBP2.51□□□□□ -2.01
CSF1YLR087C GCN20P43535 752 aaKnown RBP2.51□□□□□ -2.01
CSF1YLR087C SPO71Q03868 1245 aa2.51□□□□□ -2.01
CSF1YLR087C YDL144CQ07589 356 aa2.51□□□□□ -2.01
CSF1YLR087C HMG1P12683 1054 aa2.51□□□□□ -2.01
CSF1YLR087C DAL5P15365 543 aa2.51□□□□□ -2.01
CSF1YLR087C GFD2P25370 566 aaKnown RBP2.51□□□□□ -2.01
CSF1YLR087C PBY1P38254 753 aa2.51□□□□□ -2.01
CSF1YLR087C AGX1P43567 385 aa2.51□□□□□ -2.01
CSF1YLR087C FYV8P46949 817 aaKnown RBP2.51□□□□□ -2.01
CSF1YLR087C SAP4P53036 818 aa2.51□□□□□ -2.01
CSF1YLR087C YNL181WP53878 407 aa2.51□□□□□ -2.01
CSF1YLR087C HXT15P54854 567 aa2.51□□□□□ -2.01
CSF1YLR087C GGA1Q06336 557 aa2.51□□□□□ -2.01
CSF1YLR087C CFT2Q12102 859 aaPredicted RBP2.51□□□□□ -2.01
CSF1YLR087C TFC8Q12308 588 aa2.51□□□□□ -2.01
CSF1YLR087C LAM4P38800 1345 aa2.51□□□□□ -2.01
CSF1YLR087C CLN2P20438 545 aa2.51□□□□□ -2.01
CSF1YLR087C MGM1P32266 881 aa2.51□□□□□ -2.01
CSF1YLR087C ELM1P32801 640 aa2.51□□□□□ -2.01
CSF1YLR087C YKL133CP36066 463 aa2.51□□□□□ -2.01
CSF1YLR087C RTT107P38850 1070 aa2.51□□□□□ -2.01
CSF1YLR087C ZRG8P40021 1076 aa2.51□□□□□ -2.01
CSF1YLR087C GET1P53192 235 aa2.51□□□□□ -2.01
CSF1YLR087C UFD2P54860 961 aa2.51□□□□□ -2.01
CSF1YLR087C SKI8Q02793 397 aaPredicted RBP2.51□□□□□ -2.01
CSF1YLR087C RSC3Q06639 885 aa2.51□□□□□ -2.01
CSF1YLR087C NHA1Q99271 985 aa2.51□□□□□ -2.01
CSF1YLR087C REV3P14284 1504 aa2.51□□□□□ -2.01
CSF1YLR087C RED1P14291 827 aa2.51□□□□□ -2.01
CSF1YLR087C TPM1P17536 199 aaKnown RBP2.51□□□□□ -2.01
CSF1YLR087C VPH2P32341 215 aa2.51□□□□□ -2.01
CSF1YLR087C HOS2P53096 452 aaPredicted RBP2.51□□□□□ -2.01
CSF1YLR087C MDG1P53885 366 aa2.51□□□□□ -2.01
CSF1YLR087C SNX41Q04053 625 aa2.51□□□□□ -2.01
CSF1YLR087C TMA46Q12000 345 aaKnown RBP2.51□□□□□ -2.01
CSF1YLR087C PAB1P04147 577 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
CSF1YLR087C PRP19P32523 503 aaKnown RBP2.51□□□□□ -2.01
CSF1YLR087C SAC6P32599 642 aaKnown RBP2.51□□□□□ -2.01
CSF1YLR087C CSE1P33307 960 aa2.51□□□□□ -2.01
CSF1YLR087C RVS167P39743 482 aaKnown RBP2.51□□□□□ -2.01
CSF1YLR087C BIM1P40013 344 aa2.51□□□□□ -2.01
CSF1YLR087C WRS1Q12109 432 aaKnown RBP2.51□□□□□ -2.01
CSF1YLR087C LAG2Q92325 660 aa2.51□□□□□ -2.01
CSF1YLR087C YLR278CQ05854 1341 aa2.5□□□□□ -2.01
CSF1YLR087C ADE2P21264 571 aaKnown RBP2.5□□□□□ -2.01
CSF1YLR087C KIN3P22209 435 aa2.5□□□□□ -2.01
CSF1YLR087C SFP1P32432 683 aa2.5□□□□□ -2.01
CSF1YLR087C MTW1P39731 289 aa2.5□□□□□ -2.01
CSF1YLR087C FTR1P40088 404 aa2.5□□□□□ -2.01
CSF1YLR087C UBP15P50101 1230 aa2.5□□□□□ -2.01
CSF1YLR087C SHE4P51534 789 aa2.5□□□□□ -2.01
CSF1YLR087C GAD1Q04792 585 aa2.5□□□□□ -2.01
CSF1YLR087C SYO1Q07395 620 aa2.5□□□□□ -2.01
CSF1YLR087C MSC6Q08818 692 aaKnown RBP2.5□□□□□ -2.01
CSF1YLR087C CDC37P06101 506 aaKnown RBP2.5□□□□□ -2.01
CSF1YLR087C KIN1P13185 1064 aa2.5□□□□□ -2.01
CSF1YLR087C CMK2P22517 447 aa2.5□□□□□ -2.01
CSF1YLR087C RAD16P31244 790 aa2.5□□□□□ -2.01
CSF1YLR087C ADE12P80210 433 aaKnown RBP2.5□□□□□ -2.01
CSF1YLR087C TBF1Q02457 562 aa2.5□□□□□ -2.01
CSF1YLR087C EGD1Q02642 157 aaKnown RBP2.5□□□□□ -2.01
CSF1YLR087C TAF8Q03750 510 aa2.5□□□□□ -2.01
CSF1YLR087C YLR031WQ07978 186 aa2.5□□□□□ -2.01
CSF1YLR087C HAL9Q12180 1030 aa2.5□□□□□ -2.01
CSF1YLR087C LDB17Q12342 491 aa2.5□□□□□ -2.01
CSF1YLR087C SEY1Q99287 776 aa2.5□□□□□ -2.01
CSF1YLR087C ATP6P00854 259 aa2.5□□□□□ -2.01
CSF1YLR087C POL30P15873 258 aaKnown RBP2.5□□□□□ -2.01
CSF1YLR087C ACP1P32463 125 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms