RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeastyeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKG1YKR100C MSH3P25336 1018 aa8.59□□□□□ -1.03
SKG1YKR100C WHI3P34761 661 aaKnown RBP8.59□□□□□ -1.03
SKG1YKR100C NEM1P38757 446 aa8.59□□□□□ -1.03
SKG1YKR100C MMM1P41800 426 aa8.59□□□□□ -1.03
SKG1YKR100C RSM26P47141 266 aa8.59□□□□□ -1.03
SKG1YKR100C YGR045CP53229 120 aa8.59□□□□□ -1.03
SKG1YKR100C PEX13P80667 386 aa8.59□□□□□ -1.03
SKG1YKR100C FAA3P39002 694 aa8.58□□□□□ -1.04
SKG1YKR100C MSH4P40965 878 aaPredicted RBP8.58□□□□□ -1.04
SKG1YKR100C ELA1P53861 379 aaPredicted RBP8.58□□□□□ -1.04
SKG1YKR100C NOP8Q08287 484 aaPredicted RBP8.58□□□□□ -1.04
SKG1YKR100C CTH1P47976 325 aa8.57□□□□□ -1.04
SKG1YKR100C AVO1Q08236 1176 aa8.57□□□□□ -1.04
SKG1YKR100C PUB1P32588 453 aaKnown RBP RIP-Chip data8.56□□□□□ -1.04 RIP-Chip
SKG1YKR100C LIP5P32875 414 aa8.56□□□□□ -1.04
SKG1YKR100C GLT1Q12680 2145 aaKnown RBP8.56□□□□□ -1.04
SKG1YKR100C HXK1P04806 485 aaKnown RBP8.55□□□□□ -1.04
SKG1YKR100C RPS4AP0CX35 261 aaKnown RBP8.55□□□□□ -1.04
SKG1YKR100C RPS4BP0CX36 261 aaKnown RBP8.55□□□□□ -1.04
SKG1YKR100C SQT1P35184 431 aa8.55□□□□□ -1.04
SKG1YKR100C CIT3P43635 486 aa8.55□□□□□ -1.04
SKG1YKR100C YPL109CQ02981 657 aa8.55□□□□□ -1.04
SKG1YKR100C BRE4Q07660 1125 aa8.55□□□□□ -1.04
SKG1YKR100C PEX28P38848 579 aa8.54□□□□□ -1.04
SKG1YKR100C ALT1P52893 592 aa8.54□□□□□ -1.04
SKG1YKR100C MAG2Q06436 670 aaKnown RBP8.54□□□□□ -1.04
SKG1YKR100C GCD1P09032 578 aaPredicted RBP8.53□□□□□ -1.04
SKG1YKR100C MTR4P47047 1073 aaKnown RBP8.53□□□□□ -1.04
SKG1YKR100C EAR1Q03212 550 aa8.53□□□□□ -1.04
SKG1YKR100C ADI1Q03677 179 aa8.53□□□□□ -1.04
SKG1YKR100C UTP5Q04177 643 aaKnown RBP8.53□□□□□ -1.04
SKG1YKR100C NFS1P25374 497 aa8.52□□□□□ -1.05
SKG1YKR100C RCM1P53972 490 aa8.52□□□□□ -1.05
SKG1YKR100C SDH1Q00711 640 aa8.52□□□□□ -1.05
SKG1YKR100C VPS13Q07878 3144 aa8.51□□□□□ -1.05
SKG1YKR100C SMY2P32909 740 aaKnown RBP8.51□□□□□ -1.05
SKG1YKR100C POL32P47110 350 aa8.51□□□□□ -1.05
SKG1YKR100C ATE1P16639 503 aa8.5□□□□□ -1.05
SKG1YKR100C NNK1P36003 928 aa8.5□□□□□ -1.05
SKG1YKR100C SEA4P38164 1038 aa8.5□□□□□ -1.05
SKG1YKR100C YAR028WP39548 234 aa8.5□□□□□ -1.05
SKG1YKR100C XKS1P42826 600 aa8.5□□□□□ -1.05
SKG1YKR100C YGL140CP53120 1219 aa8.5□□□□□ -1.05
SKG1YKR100C YOR059CQ08448 450 aaKnown RBP8.5□□□□□ -1.05
SKG1YKR100C PDR5P33302 1511 aaKnown RBP8.49□□□□□ -1.05
SKG1YKR100C VMA4P22203 233 aaKnown RBP8.49□□□□□ -1.05
SKG1YKR100C HEM13P11353 328 aaKnown RBP8.48□□□□□ -1.05
SKG1YKR100C RDH54P38086 958 aa8.48□□□□□ -1.05
SKG1YKR100C PIC2P40035 300 aa8.48□□□□□ -1.05
SKG1YKR100C YGR122WP53272 402 aa8.48□□□□□ -1.05
SKG1YKR100C MGE1P38523 228 aa8.47□□□□□ -1.05
SKG1YKR100C OYE3P41816 400 aaPredicted RBP8.47□□□□□ -1.05
SKG1YKR100C NSI1Q12457 570 aa8.47□□□□□ -1.05
SKG1YKR100C NUM1Q00402 2748 aa8.46□□□□□ -1.05
SKG1YKR100C SCP160P06105 1222 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
SKG1YKR100C HEM3P28789 327 aa8.46□□□□□ -1.06
SKG1YKR100C YNR063WP53749 607 aa8.46□□□□□ -1.06
SKG1YKR100C YVC1Q12324 675 aa8.46□□□□□ -1.06
SKG1YKR100C MCM2P29469 868 aa8.45□□□□□ -1.06
SKG1YKR100C RPS26AP39938 119 aaKnown RBP8.45□□□□□ -1.06
SKG1YKR100C RPS26BP39939 119 aaKnown RBP8.45□□□□□ -1.06
SKG1YKR100C RRP15Q06511 250 aaPredicted RBP8.45□□□□□ -1.06
SKG1YKR100C SEC23P15303 768 aaKnown RBP8.44□□□□□ -1.06
SKG1YKR100C RET1P22276 1149 aaKnown RBP8.44□□□□□ -1.06
SKG1YKR100C ATG14P38270 344 aa8.44□□□□□ -1.06
SKG1YKR100C NMD3P38861 518 aaKnown RBP8.44□□□□□ -1.06
SKG1YKR100C DUS1P53759 423 aaKnown RBP8.44□□□□□ -1.06
SKG1YKR100C PUS7Q08647 676 aaKnown RBP8.44□□□□□ -1.06
SKG1YKR100C CYC8P14922 966 aa8.43□□□□□ -1.06
SKG1YKR100C PRE9P23638 258 aaKnown RBP8.43□□□□□ -1.06
SKG1YKR100C MRPS18P42847 217 aa8.43□□□□□ -1.06
SKG1YKR100C TPP1Q03796 238 aa8.43□□□□□ -1.06
SKG1YKR100C YLR257WQ06146 321 aaKnown RBP8.43□□□□□ -1.06
SKG1YKR100C LAP2Q10740 671 aa8.43□□□□□ -1.06
SKG1YKR100C MCD1Q12158 566 aa8.43□□□□□ -1.06
SKG1YKR100C RAD2P07276 1031 aa8.42□□□□□ -1.06
SKG1YKR100C ADD66P36040 267 aa8.42□□□□□ -1.06
SKG1YKR100C YJR107WP47145 328 aa8.42□□□□□ -1.06
SKG1YKR100C RSA3Q05942 220 aaKnown RBP8.42□□□□□ -1.06
SKG1YKR100C TRE1Q08919 783 aa8.42□□□□□ -1.06
SKG1YKR100C HSE1P38753 452 aa8.41□□□□□ -1.06
SKG1YKR100C RPN11P43588 306 aaKnown RBP8.41□□□□□ -1.06
SKG1YKR100C EST2Q06163 884 aa8.41□□□□□ -1.06
SKG1YKR100C PEX7P39108 375 aa8.4□□□□□ -1.06
SKG1YKR100C FYV10P40492 516 aa8.4□□□□□ -1.06
SKG1YKR100C SPR28Q04921 423 aa8.4□□□□□ -1.06
SKG1YKR100C LYS4P49367 693 aaPredicted RBP8.39□□□□□ -1.07
SKG1YKR100C RKM2Q03942 479 aa8.39□□□□□ -1.07
SKG1YKR100C CAT8P39113 1433 aa8.38□□□□□ -1.07
SKG1YKR100C AVT1P47082 602 aa8.38□□□□□ -1.07
SKG1YKR100C SSY1Q03770 852 aa8.38□□□□□ -1.07
SKG1YKR100C DED1P06634 604 aaKnown RBP8.37□□□□□ -1.07
SKG1YKR100C ADP1P25371 1049 aa8.37□□□□□ -1.07
SKG1YKR100C QNS1P38795 714 aaKnown RBP8.37□□□□□ -1.07
SKG1YKR100C HDA2Q06629 674 aa8.37□□□□□ -1.07
SKG1YKR100C PRO1P32264 428 aa8.36□□□□□ -1.07
SKG1YKR100C AFG2P32794 780 aa8.36□□□□□ -1.07
SKG1YKR100C SEC8P32855 1065 aa8.36□□□□□ -1.07
SKG1YKR100C LRG1P35688 1017 aa8.36□□□□□ -1.07
SKG1YKR100C HRK1Q08732 759 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 108.2 ms