RNA–Protein interactions for RNA: YKL164C

PIR1, Transcript of O-glycosylated protein required for cell wall stability, yeast

Gene PIR1, Length 1,026 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIR1	YKL164C	MAE1	P36013	669 aa	Known RBP	4.66	□□□□□ -1.66
PIR1	YKL164C	KIP3	P53086	805 aa	Known RBP	4.66	□□□□□ -1.66
PIR1	YKL164C	RAT1	Q02792	1006 aa	Known RBP	4.66	□□□□□ -1.66
PIR1	YKL164C	TY1A-NL1	Q12391	440 aa	Known RBP	4.66	□□□□□ -1.66
PIR1	YKL164C	NUP170	P38181	1502 aa		4.66	□□□□□ -1.66
PIR1	YKL164C	SEC7	P11075	2009 aa	Known RBP	4.65	□□□□□ -1.66
PIR1	YKL164C	CAT8	P39113	1433 aa		4.65	□□□□□ -1.66
PIR1	YKL164C	RAD27	P26793	382 aa		4.65	□□□□□ -1.67
PIR1	YKL164C	LYP1	P32487	611 aa		4.65	□□□□□ -1.67
PIR1	YKL164C	IOC3	P43596	787 aa		4.65	□□□□□ -1.67
PIR1	YKL164C	BUD9	P53226	547 aa		4.65	□□□□□ -1.67
PIR1	YKL164C	YGR045C	P53229	120 aa		4.65	□□□□□ -1.67
PIR1	YKL164C	NCE103	P53615	221 aa		4.65	□□□□□ -1.67
PIR1	YKL164C	YNR014W	P53719	212 aa		4.65	□□□□□ -1.67
PIR1	YKL164C	DSE4	P53753	1117 aa		4.65	□□□□□ -1.67
PIR1	YKL164C	FAR11	P53917	953 aa		4.65	□□□□□ -1.67
PIR1	YKL164C	RKM2	Q03942	479 aa		4.65	□□□□□ -1.67
PIR1	YKL164C	YMR074C	Q04773	145 aa		4.65	□□□□□ -1.67
PIR1	YKL164C	ESC2	Q06340	456 aa		4.65	□□□□□ -1.67
PIR1	YKL164C	TRM3	Q07527	1436 aa		4.64	□□□□□ -1.67
PIR1	YKL164C	BAS1	P22035	811 aa		4.64	□□□□□ -1.67
PIR1	YKL164C	MDJ1	P35191	511 aa		4.64	□□□□□ -1.67
PIR1	YKL164C	MCX1	P38323	520 aa	Predicted RBP	4.64	□□□□□ -1.67
PIR1	YKL164C	SPF1	P39986	1215 aa	Known RBP	4.64	□□□□□ -1.67
PIR1	YKL164C	TYW3	P53177	273 aa		4.64	□□□□□ -1.67
PIR1	YKL164C	TDA6	Q06466	467 aa		4.64	□□□□□ -1.67
PIR1	YKL164C	THI72	Q08579	599 aa		4.64	□□□□□ -1.67
PIR1	YKL164C	FAL1	Q12099	399 aa	Known RBP	4.64	□□□□□ -1.67
PIR1	YKL164C	WRS1	Q12109	432 aa	Known RBP	4.64	□□□□□ -1.67
PIR1	YKL164C	YOL098C	Q12496	1037 aa		4.64	□□□□□ -1.67
PIR1	YKL164C	PDR10	P51533	1564 aa		4.63	□□□□□ -1.67
PIR1	YKL164C	GRX1	P25373	110 aa	Known RBP	4.63	□□□□□ -1.67
PIR1	YKL164C	SYP1	P25623	870 aa	Known RBP	4.63	□□□□□ -1.67
PIR1	YKL164C	SEA4	P38164	1038 aa		4.63	□□□□□ -1.67
PIR1	YKL164C	YAR028W	P39548	234 aa		4.63	□□□□□ -1.67
PIR1	YKL164C	YNR063W	P53749	607 aa		4.63	□□□□□ -1.67
PIR1	YKL164C	TIF35	Q04067	274 aa	Known RBP	4.63	□□□□□ -1.67
PIR1	YKL164C	YLR225C	Q05948	407 aa	Known RBP	4.63	□□□□□ -1.67
PIR1	YKL164C	YLL054C	Q12244	843 aa		4.63	□□□□□ -1.67
PIR1	YKL164C	DRS2	P39524	1355 aa		4.63	□□□□□ -1.67
PIR1	YKL164C	GEA1	P47102	1408 aa	Predicted RBP	4.63	□□□□□ -1.67
PIR1	YKL164C	IQG1	Q12280	1495 aa		4.62	□□□□□ -1.67
PIR1	YKL164C	DBP5	P20449	482 aa	Known RBP	4.62	□□□□□ -1.67
PIR1	YKL164C	MOT2	P34909	587 aa	Known RBP	4.62	□□□□□ -1.67
PIR1	YKL164C	ELA1	P53861	379 aa	Predicted RBP	4.62	□□□□□ -1.67
PIR1	YKL164C	DOT1	Q04089	582 aa	Known RBP	4.62	□□□□□ -1.67
PIR1	YKL164C	TDA5	Q06417	326 aa	Known RBP	4.62	□□□□□ -1.67
PIR1	YKL164C	YOR223W	Q12015	292 aa		4.62	□□□□□ -1.67
PIR1	YKL164C	YPL066W	Q12194	479 aa		4.62	□□□□□ -1.67
PIR1	YKL164C	TY3B-G	Q99315	1547 aa		4.62	□□□□□ -1.67
PIR1	YKL164C	CHC1	P22137	1653 aa	Known RBP	4.61	□□□□□ -1.67
PIR1	YKL164C	AI3	P03877	415 aa		4.61	□□□□□ -1.67
PIR1	YKL164C	YCK2	P23292	546 aa	Known RBP	4.61	□□□□□ -1.67
PIR1	YKL164C	AGP1	P25376	633 aa		4.61	□□□□□ -1.67
PIR1	YKL164C	SFA1	P32771	386 aa		4.61	□□□□□ -1.67
PIR1	YKL164C	ABD1	P32783	436 aa	Predicted RBP	4.61	□□□□□ -1.67
PIR1	YKL164C	STE5	P32917	917 aa		4.61	□□□□□ -1.67
PIR1	YKL164C	ALG3	P38179	458 aa		4.61	□□□□□ -1.67
PIR1	YKL164C	YJL049W	P47048	450 aa		4.61	□□□□□ -1.67
PIR1	YKL164C	NSE3	Q05541	303 aa		4.61	□□□□□ -1.67
PIR1	YKL164C	AOS1	Q06624	347 aa		4.61	□□□□□ -1.67
PIR1	YKL164C	AVO1	Q08236	1176 aa		4.61	□□□□□ -1.67
PIR1	YKL164C	YDR215C	Q12240	137 aa		4.61	□□□□□ -1.67
PIR1	YKL164C	INO1	P11986	533 aa		4.6	□□□□□ -1.67
PIR1	YKL164C	GPT2	P36148	743 aa		4.6	□□□□□ -1.67
PIR1	YKL164C	SLN1	P39928	1220 aa	Predicted RBP	4.6	□□□□□ -1.67
PIR1	YKL164C	MPH1	P40562	993 aa		4.6	□□□□□ -1.67
PIR1	YKL164C	CNN1	P43618	361 aa		4.6	□□□□□ -1.67
PIR1	YKL164C	PRY1	P47032	299 aa		4.6	□□□□□ -1.67
PIR1	YKL164C	NSG2	P53898	299 aa		4.6	□□□□□ -1.67
PIR1	YKL164C	RSA3	Q05942	220 aa	Known RBP	4.6	□□□□□ -1.67
PIR1	YKL164C	DNF2	Q12675	1612 aa		4.6	□□□□□ -1.67
PIR1	YKL164C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	RIP-Chip
PIR1	YKL164C	SBA1	P28707	216 aa	Known RBP	4.59	□□□□□ -1.67
PIR1	YKL164C	VBA5	P36172	582 aa		4.59	□□□□□ -1.67
PIR1	YKL164C	MSH4	P40965	878 aa	Predicted RBP	4.59	□□□□□ -1.67
PIR1	YKL164C	SPO20	Q04359	397 aa		4.59	□□□□□ -1.67
PIR1	YKL164C	BDF2	Q07442	638 aa		4.59	□□□□□ -1.67
PIR1	YKL164C	PTC5	Q12511	572 aa		4.59	□□□□□ -1.67
PIR1	YKL164C	ARO1	P08566	1588 aa	Known RBP	4.58	□□□□□ -1.68
PIR1	YKL164C	RAD4	P14736	754 aa		4.58	□□□□□ -1.68
PIR1	YKL164C	RET1	P22276	1149 aa	Known RBP	4.58	□□□□□ -1.68
PIR1	YKL164C	MLS1	P30952	554 aa		4.58	□□□□□ -1.68
PIR1	YKL164C	YBR184W	P38299	523 aa		4.58	□□□□□ -1.68
PIR1	YKL164C	RGD1	P38339	666 aa		4.58	□□□□□ -1.68
PIR1	YKL164C	QNS1	P38795	714 aa	Known RBP	4.58	□□□□□ -1.68
PIR1	YKL164C	ARI1	P53111	347 aa	Known RBP	4.58	□□□□□ -1.68
PIR1	YKL164C	NAN1	Q02931	896 aa	Known RBP	4.58	□□□□□ -1.68
PIR1	YKL164C	SHE9	Q04172	456 aa		4.58	□□□□□ -1.68
PIR1	YKL164C	YLR257W	Q06146	321 aa	Known RBP	4.58	□□□□□ -1.68
PIR1	YKL164C	LAP2	Q10740	671 aa		4.58	□□□□□ -1.68
PIR1	YKL164C	NUP157	P40064	1391 aa	Known RBP	4.57	□□□□□ -1.68
PIR1	YKL164C	SMY2	P32909	740 aa	Known RBP	4.57	□□□□□ -1.68
PIR1	YKL164C	MCM7	P38132	845 aa		4.57	□□□□□ -1.68
PIR1	YKL164C	ATG14	P38270	344 aa		4.57	□□□□□ -1.68
PIR1	YKL164C	NMD3	P38861	518 aa	Known RBP	4.57	□□□□□ -1.68
PIR1	YKL164C	VPS53	P47061	822 aa		4.57	□□□□□ -1.68
PIR1	YKL164C	HUL5	P53119	910 aa		4.57	□□□□□ -1.68
PIR1	YKL164C	EAR1	Q03212	550 aa		4.57	□□□□□ -1.68
PIR1	YKL164C	RKM4	Q12504	494 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms