RNA–Protein interactions for RNA: YKL057C

NUP120, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeast

Gene NUP120, Length 3,114 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP120	YKL057C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
NUP120	YKL057C	CIT3	P43635	486 aa		3.13	□□□□□ -1.91
NUP120	YKL057C	BIO5	P53744	561 aa	Known RBP	3.13	□□□□□ -1.91
NUP120	YKL057C	UTP5	Q04177	643 aa	Known RBP	3.13	□□□□□ -1.91
NUP120	YKL057C	RKM4	Q12504	494 aa		3.13	□□□□□ -1.91
NUP120	YKL057C	CIT2	P08679	460 aa		3.13	□□□□□ -1.91
NUP120	YKL057C	MDJ1	P35191	511 aa		3.13	□□□□□ -1.91
NUP120	YKL057C	OMA1	P36163	345 aa		3.13	□□□□□ -1.91
NUP120	YKL057C	TOS1	P38288	455 aa		3.13	□□□□□ -1.91
NUP120	YKL057C	YFL052W	P43551	465 aa		3.13	□□□□□ -1.91
NUP120	YKL057C	JJJ3	P47138	172 aa		3.13	□□□□□ -1.91
NUP120	YKL057C	YGL140C	P53120	1219 aa		3.13	□□□□□ -1.91
NUP120	YKL057C	CYC7	P00045	113 aa		3.12	□□□□□ -1.91
NUP120	YKL057C	SPS1	P08458	490 aa		3.12	□□□□□ -1.91
NUP120	YKL057C	NEM1	P38757	446 aa		3.12	□□□□□ -1.91
NUP120	YKL057C	MBP1	P39678	833 aa		3.12	□□□□□ -1.91
NUP120	YKL057C	ALO1	P54783	526 aa	Known RBP	3.12	□□□□□ -1.91
NUP120	YKL057C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
NUP120	YKL057C	PIN2	Q12057	282 aa		3.12	□□□□□ -1.91
NUP120	YKL057C	YLR125W	Q12138	136 aa		3.12	□□□□□ -1.91
NUP120	YKL057C	KIP1	P28742	1111 aa		3.12	□□□□□ -1.91
NUP120	YKL057C	PBY1	P38254	753 aa		3.12	□□□□□ -1.91
NUP120	YKL057C	YBR184W	P38299	523 aa		3.12	□□□□□ -1.91
NUP120	YKL057C	PEA2	P40091	420 aa		3.12	□□□□□ -1.91
NUP120	YKL057C	LSB3	P43603	459 aa	Known RBP	3.12	□□□□□ -1.91
NUP120	YKL057C	YJL045W	P47052	634 aa		3.12	□□□□□ -1.91
NUP120	YKL057C	YTA7	P40340	1379 aa		3.11	□□□□□ -1.91
NUP120	YKL057C	CIT1	P00890	479 aa		3.11	□□□□□ -1.91
NUP120	YKL057C	TAF13	P11747	167 aa		3.11	□□□□□ -1.91
NUP120	YKL057C	CAD1	P24813	409 aa	Known RBP	3.11	□□□□□ -1.91
NUP120	YKL057C	RGD1	P38339	666 aa		3.11	□□□□□ -1.91
NUP120	YKL057C	QNS1	P38795	714 aa	Known RBP	3.11	□□□□□ -1.91
NUP120	YKL057C	MSH4	P40965	878 aa	Predicted RBP	3.11	□□□□□ -1.91
NUP120	YKL057C	YPL260W	Q08977	551 aa		3.11	□□□□□ -1.91
NUP120	YKL057C	MSB1	P21339	1137 aa	Known RBP	3.11	□□□□□ -1.91
NUP120	YKL057C	SBA1	P28707	216 aa	Known RBP	3.11	□□□□□ -1.91
NUP120	YKL057C	SMY2	P32909	740 aa	Known RBP	3.11	□□□□□ -1.91
NUP120	YKL057C	YKR075C	P36155	307 aa		3.11	□□□□□ -1.91
NUP120	YKL057C	TFA2	P36145	328 aa		3.1	□□□□□ -1.91
NUP120	YKL057C	RPN10	P38886	268 aa	Known RBP	3.1	□□□□□ -1.91
NUP120	YKL057C	CRR1	Q05790	422 aa		3.1	□□□□□ -1.91
NUP120	YKL057C	NUP82	P40368	713 aa		3.1	□□□□□ -1.91
NUP120	YKL057C	CEP3	P40969	608 aa		3.1	□□□□□ -1.91
NUP120	YKL057C	GTF1	P53260	183 aa	Predicted RBP	3.1	□□□□□ -1.91
NUP120	YKL057C	SIW14	P53965	281 aa		3.1	□□□□□ -1.91
NUP120	YKL057C	RSA3	Q05942	220 aa	Known RBP	3.1	□□□□□ -1.91
NUP120	YKL057C	HDA2	Q06629	674 aa		3.1	□□□□□ -1.91
NUP120	YKL057C	CMP2	P14747	604 aa		3.1	□□□□□ -1.91
NUP120	YKL057C	VBA5	P36172	582 aa		3.1	□□□□□ -1.91
NUP120	YKL057C	PUS7	Q08647	676 aa	Known RBP	3.1	□□□□□ -1.91
NUP120	YKL057C	SVS1	Q12254	260 aa		3.1	□□□□□ -1.91
NUP120	YKL057C	PRC1	P00729	532 aa		3.09	□□□□□ -1.91
NUP120	YKL057C	YDR514C	Q04408	483 aa		3.09	□□□□□ -1.91
NUP120	YKL057C	TY1A-LR4	P0C2I8	440 aa	Known RBP	3.09	□□□□□ -1.92
NUP120	YKL057C	TY1A-DR6	P0CX70	440 aa		3.09	□□□□□ -1.92
NUP120	YKL057C	TY1A-ER1	P0CX71	440 aa		3.09	□□□□□ -1.92
NUP120	YKL057C	TY1A-LR2	P0CX72	440 aa		3.09	□□□□□ -1.92
NUP120	YKL057C	TY1A-PL	P0CX73	440 aa		3.09	□□□□□ -1.92
NUP120	YKL057C	TY1A-JR1	P0CX74	440 aa		3.09	□□□□□ -1.92
NUP120	YKL057C	TY1A-LR3	P0CX75	440 aa		3.09	□□□□□ -1.92
NUP120	YKL057C	TY1A-ML2	P0CX76	440 aa		3.09	□□□□□ -1.92
NUP120	YKL057C	DBP5	P20449	482 aa	Known RBP	3.09	□□□□□ -1.92
NUP120	YKL057C	SRM1	P21827	482 aa		3.09	□□□□□ -1.92
NUP120	YKL057C	COX18	P53239	316 aa		3.09	□□□□□ -1.92
NUP120	YKL057C	HOS3	Q02959	697 aa	Known RBP	3.09	□□□□□ -1.92
NUP120	YKL057C	TY1A-GR1	Q12085	440 aa		3.09	□□□□□ -1.92
NUP120	YKL057C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	3.09	□□□□□ -1.92
NUP120	YKL057C	TY1A-OL	Q92392	440 aa	Known RBP	3.09	□□□□□ -1.92
NUP120	YKL057C	TY4B-P	A0A0B7P3V8	1104 aa		3.08	□□□□□ -1.92
NUP120	YKL057C	ARL1	P38116	183 aa	Known RBP	3.08	□□□□□ -1.92
NUP120	YKL057C	ALY2	P47029	1046 aa		3.08	□□□□□ -1.92
NUP120	YKL057C	YOR059C	Q08448	450 aa	Known RBP	3.08	□□□□□ -1.92
NUP120	YKL057C	TY4A-H	Q6Q5P6	413 aa		3.08	□□□□□ -1.92
NUP120	YKL057C	SEC15	P22224	910 aa		3.08	□□□□□ -1.92
NUP120	YKL057C	POL12	P38121	705 aa	Predicted RBP	3.08	□□□□□ -1.92
NUP120	YKL057C	SDH1	Q00711	640 aa		3.08	□□□□□ -1.92
NUP120	YKL057C	TIF35	Q04067	274 aa	Known RBP	3.08	□□□□□ -1.92
NUP120	YKL057C	GNT1	Q12096	491 aa		3.08	□□□□□ -1.92
NUP120	YKL057C	MKK2	P32491	506 aa		3.08	□□□□□ -1.92
NUP120	YKL057C	MXR1	P40029	184 aa		3.08	□□□□□ -1.92
NUP120	YKL057C	PIC2	P40035	300 aa		3.08	□□□□□ -1.92
NUP120	YKL057C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
NUP120	YKL057C	MED7	Q08278	222 aa		3.08	□□□□□ -1.92
NUP120	YKL057C	FLC1	Q08967	793 aa		3.08	□□□□□ -1.92
NUP120	YKL057C	RPP2A	P05319	106 aa	Known RBP	3.07	□□□□□ -1.92
NUP120	YKL057C	TSR4	P25040	408 aa		3.07	□□□□□ -1.92
NUP120	YKL057C	RER2	P35196	286 aa		3.07	□□□□□ -1.92
NUP120	YKL057C	MNN1	P39106	762 aa		3.07	□□□□□ -1.92
NUP120	YKL057C	SLN1	P39928	1220 aa	Predicted RBP	3.07	□□□□□ -1.92
NUP120	YKL057C	IRR1	P40541	1150 aa		3.07	□□□□□ -1.92
NUP120	YKL057C	HSV2	P50079	448 aa	Predicted RBP	3.07	□□□□□ -1.92
NUP120	YKL057C	YPL034W	Q03083	165 aa		3.07	□□□□□ -1.92
NUP120	YKL057C	ESC2	Q06340	456 aa		3.07	□□□□□ -1.92
NUP120	YKL057C	YIG1	Q08956	461 aa		3.07	□□□□□ -1.92
NUP120	YKL057C	REC8	Q12188	680 aa		3.07	□□□□□ -1.92
NUP120	YKL057C	ADR1	P07248	1323 aa		3.07	□□□□□ -1.92
NUP120	YKL057C	RFC5	P38251	354 aa		3.07	□□□□□ -1.92
NUP120	YKL057C	EXO5	P38289	585 aa		3.07	□□□□□ -1.92
NUP120	YKL057C	YPL062W	Q02781	134 aa		3.07	□□□□□ -1.92
NUP120	YKL057C	NSE3	Q05541	303 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 58.6 ms