RNA–Protein interactions for RNA: YJR057W

CDC8, Transcript of Thymidylate and uridylate kinase, yeastyeast

Gene CDC8, Length 651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC8YJR057W ATE1P16639 503 aa6.05□□□□□ -1.44
CDC8YJR057W BAP2P38084 609 aa6.05□□□□□ -1.44
CDC8YJR057W RPS26AP39938 119 aaKnown RBP6.05□□□□□ -1.44
CDC8YJR057W RPS26BP39939 119 aaKnown RBP6.05□□□□□ -1.44
CDC8YJR057W SEC26P41810 973 aaKnown RBP6.05□□□□□ -1.44
CDC8YJR057W RCL1Q08096 367 aaPredicted RBP6.05□□□□□ -1.44
CDC8YJR057W RSB1Q08417 382 aa6.05□□□□□ -1.44
CDC8YJR057W DED1P06634 604 aaKnown RBP6.04□□□□□ -1.44
CDC8YJR057W ALG3P38179 458 aa6.04□□□□□ -1.44
CDC8YJR057W RPN3P40016 523 aaKnown RBP6.04□□□□□ -1.44
CDC8YJR057W POL32P47110 350 aa6.04□□□□□ -1.44
CDC8YJR057W ROD1Q02805 837 aa6.04□□□□□ -1.44
CDC8YJR057W GSF2Q04697 403 aaKnown RBP6.04□□□□□ -1.44
CDC8YJR057W YPL260WQ08977 551 aa6.04□□□□□ -1.44
CDC8YJR057W PUF4P25339 888 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
CDC8YJR057W MCM2P29469 868 aa6.03□□□□□ -1.44
CDC8YJR057W PIK1P39104 1066 aa6.03□□□□□ -1.44
CDC8YJR057W GPB2P39717 880 aa6.03□□□□□ -1.44
CDC8YJR057W YJR107WP47145 328 aa6.03□□□□□ -1.44
CDC8YJR057W ENT3P47160 408 aa6.03□□□□□ -1.44
CDC8YJR057W GNP1P48813 663 aa6.03□□□□□ -1.44
CDC8YJR057W SIW14P53965 281 aa6.03□□□□□ -1.44
CDC8YJR057W YML020WQ03722 664 aa6.03□□□□□ -1.44
CDC8YJR057W SGD1Q06132 899 aa6.03□□□□□ -1.44
CDC8YJR057W RRP15Q06511 250 aaPredicted RBP6.03□□□□□ -1.44
CDC8YJR057W NOP8Q08287 484 aaPredicted RBP6.03□□□□□ -1.44
CDC8YJR057W MGE1P38523 228 aa6.02□□□□□ -1.45
CDC8YJR057W HXT13P39924 564 aa6.02□□□□□ -1.45
CDC8YJR057W HXT17P53631 564 aa6.02□□□□□ -1.45
CDC8YJR057W HXT15P54854 567 aa6.02□□□□□ -1.45
CDC8YJR057W RAT1Q02792 1006 aaKnown RBP6.02□□□□□ -1.45
CDC8YJR057W PRE10P21242 288 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
CDC8YJR057W CLU1Q03690 1277 aaKnown RBP6.01□□□□□ -1.45
CDC8YJR057W SNF5P18480 905 aa6□□□□□ -1.45
CDC8YJR057W MKK2P32491 506 aa6□□□□□ -1.45
CDC8YJR057W SEC8P32855 1065 aa6□□□□□ -1.45
CDC8YJR057W LAM1P38851 1228 aa6□□□□□ -1.45
CDC8YJR057W FYV10P40492 516 aa5.99□□□□□ -1.45
CDC8YJR057W SPR28Q04921 423 aa5.99□□□□□ -1.45
CDC8YJR057W SPO21Q12411 609 aa5.99□□□□□ -1.45
CDC8YJR057W GCR1P07261 785 aa5.98□□□□□ -1.45
CDC8YJR057W MEF2P39677 819 aa5.98□□□□□ -1.45
CDC8YJR057W MRL1Q06815 381 aa5.98□□□□□ -1.45
CDC8YJR057W SPT20P50875 604 aa5.97□□□□□ -1.45
CDC8YJR057W GCN5Q03330 439 aa5.97□□□□□ -1.45
CDC8YJR057W YDR132CQ03900 495 aa5.97□□□□□ -1.45
CDC8YJR057W RSM24Q03976 319 aa5.97□□□□□ -1.45
CDC8YJR057W HIR3P47171 1648 aa5.96□□□□□ -1.45
CDC8YJR057W CYC1P00044 109 aaPredicted RBP5.96□□□□□ -1.46
CDC8YJR057W HEM3P28789 327 aa5.96□□□□□ -1.46
CDC8YJR057W DOM34P33309 386 aa5.96□□□□□ -1.46
CDC8YJR057W ABZ1P37254 787 aaPredicted RBP5.96□□□□□ -1.46
CDC8YJR057W RGD1P38339 666 aa5.96□□□□□ -1.46
CDC8YJR057W TAT2P38967 592 aa5.96□□□□□ -1.46
CDC8YJR057W SYP1P25623 870 aaKnown RBP5.95□□□□□ -1.46
CDC8YJR057W SHM2P37291 469 aaKnown RBP5.95□□□□□ -1.46
CDC8YJR057W RFC5P38251 354 aa5.95□□□□□ -1.46
CDC8YJR057W MPT5P39016 859 aaKnown RBP RIP-Chip data5.95□□□□□ -1.46not detected
CDC8YJR057W XRN1P22147 1528 aaKnown RBP5.94□□□□□ -1.46
CDC8YJR057W YFL054CP43549 646 aa5.94□□□□□ -1.46
CDC8YJR057W TUB2P02557 457 aaKnown RBP5.93□□□□□ -1.46
CDC8YJR057W YER152CP10356 443 aa5.93□□□□□ -1.46
CDC8YJR057W DBP5P20449 482 aaKnown RBP5.93□□□□□ -1.46
CDC8YJR057W CNN1P43618 361 aa5.93□□□□□ -1.46
CDC8YJR057W PBP1P53297 722 aaKnown RBP5.93□□□□□ -1.46
CDC8YJR057W ESF1Q06344 628 aaKnown RBP5.93□□□□□ -1.46
CDC8YJR057W URN1Q06525 465 aaKnown RBP5.93□□□□□ -1.46
CDC8YJR057W DNA2P38859 1522 aa5.93□□□□□ -1.46
CDC8YJR057W KIN2P13186 1147 aaKnown RBP5.92□□□□□ -1.46
CDC8YJR057W CTS1P29029 562 aa5.92□□□□□ -1.46
CDC8YJR057W MLS1P30952 554 aa5.92□□□□□ -1.46
CDC8YJR057W MPH1P40562 993 aa5.92□□□□□ -1.46
CDC8YJR057W RER2P35196 286 aa5.91□□□□□ -1.46
CDC8YJR057W ROT1Q03691 256 aa5.91□□□□□ -1.46
CDC8YJR057W RXT3Q07458 294 aa5.91□□□□□ -1.46
CDC8YJR057W RMD1Q03441 430 aa5.9□□□□□ -1.46
CDC8YJR057W DUS4Q06063 367 aa5.9□□□□□ -1.46
CDC8YJR057W RTT10Q08924 1013 aa5.9□□□□□ -1.46
CDC8YJR057W PEP7P32609 515 aa5.89□□□□□ -1.47
CDC8YJR057W SVS1Q12254 260 aa5.89□□□□□ -1.47
CDC8YJR057W ASF1P32447 279 aa5.88□□□□□ -1.47
CDC8YJR057W TIF35Q04067 274 aaKnown RBP5.88□□□□□ -1.47
CDC8YJR057W ATG13Q06628 738 aa5.88□□□□□ -1.47
CDC8YJR057W PNS1Q12412 539 aa5.88□□□□□ -1.47
CDC8YJR057W GAL10P04397 699 aa5.87□□□□□ -1.47
CDC8YJR057W CMP2P14747 604 aa5.87□□□□□ -1.47
CDC8YJR057W SRM1P21827 482 aa5.87□□□□□ -1.47
CDC8YJR057W STE11P23561 717 aa5.87□□□□□ -1.47
CDC8YJR057W RAD27P26793 382 aa5.87□□□□□ -1.47
CDC8YJR057W DUT1P33317 147 aa5.87□□□□□ -1.47
CDC8YJR057W PLB2Q03674 706 aa5.87□□□□□ -1.47
CDC8YJR057W ACK1Q07622 623 aaPredicted RBP5.87□□□□□ -1.47
CDC8YJR057W RIB2Q12362 591 aaKnown RBP5.87□□□□□ -1.47
CDC8YJR057W KOG1P38873 1557 aa5.86□□□□□ -1.47
CDC8YJR057W TRM2P33753 639 aa5.86□□□□□ -1.47
CDC8YJR057W OYE2Q03558 400 aaKnown RBP5.86□□□□□ -1.47
CDC8YJR057W GPB1Q08886 897 aa5.86□□□□□ -1.47
CDC8YJR057W APL1P27351 700 aa5.85□□□□□ -1.47
CDC8YJR057W MNN10P50108 393 aaKnown RBP5.85□□□□□ -1.47
CDC8YJR057W SIZ1Q04195 904 aa5.85□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms