RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	UFD2	P54860	961 aa		6.55	□□□□□ -1.36
RSC30	YHR056C	CUP1-1	P0CX80	61 aa		6.55	□□□□□ -1.36
RSC30	YHR056C	CUP1-2	P0CX81	61 aa		6.55	□□□□□ -1.36
RSC30	YHR056C	PWP2	P25635	923 aa	Known RBP	6.55	□□□□□ -1.36
RSC30	YHR056C	CLB5	P30283	435 aa		6.55	□□□□□ -1.36
RSC30	YHR056C	ANP1	P32629	500 aa		6.55	□□□□□ -1.36
RSC30	YHR056C	MOB1	P40484	314 aa		6.55	□□□□□ -1.36
RSC30	YHR056C	UBP15	P50101	1230 aa		6.55	□□□□□ -1.36
RSC30	YHR056C	NMD2	P38798	1089 aa	Known RBP	6.54	□□□□□ -1.36
RSC30	YHR056C	VPS13	Q07878	3144 aa		6.54	□□□□□ -1.36
RSC30	YHR056C	BET2	P20133	325 aa		6.54	□□□□□ -1.36
RSC30	YHR056C	RIT1	P23796	513 aa		6.54	□□□□□ -1.36
RSC30	YHR056C	YFL052W	P43551	465 aa		6.54	□□□□□ -1.36
RSC30	YHR056C	BIO2	P32451	375 aa		6.53	□□□□□ -1.36
RSC30	YHR056C	RIM4	P38741	713 aa		6.53	□□□□□ -1.36
RSC30	YHR056C	PSP2	P50109	593 aa	Known RBP	6.53	□□□□□ -1.36
RSC30	YHR056C	MYO5	Q04439	1219 aa	Known RBP	6.53	□□□□□ -1.36
RSC30	YHR056C	PRO3	P32263	286 aa	Known RBP	6.53	□□□□□ -1.36
RSC30	YHR056C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	6.53	□□□□□ -1.36	not detected
RSC30	YHR056C	ARP1	P38696	384 aa		6.53	□□□□□ -1.36
RSC30	YHR056C	BIO5	P53744	561 aa	Known RBP	6.53	□□□□□ -1.36
RSC30	YHR056C	HFI1	Q12060	488 aa		6.53	□□□□□ -1.36
RSC30	YHR056C	RKM4	Q12504	494 aa		6.53	□□□□□ -1.36
RSC30	YHR056C	KTR1	P27810	393 aa	Known RBP	6.53	□□□□□ -1.36
RSC30	YHR056C	INP51	P40559	946 aa	Known RBP	6.53	□□□□□ -1.36
RSC30	YHR056C	LSB6	P42951	607 aa		6.53	□□□□□ -1.36
RSC30	YHR056C	MDM1	Q01846	1127 aa		6.53	□□□□□ -1.36
RSC30	YHR056C	MFB1	Q04922	465 aa		6.53	□□□□□ -1.36
RSC30	YHR056C	SES1	P07284	462 aa	Known RBP	6.52	□□□□□ -1.37
RSC30	YHR056C	ACE2	P21192	770 aa		6.52	□□□□□ -1.37
RSC30	YHR056C	PTC4	P38089	393 aa		6.52	□□□□□ -1.37
RSC30	YHR056C	CRG1	P38892	291 aa	RIP-Chip data	6.52	□□□□□ -1.37	not detected
RSC30	YHR056C	JJJ3	P47138	172 aa		6.52	□□□□□ -1.37
RSC30	YHR056C	YDR461C-A	Q2V2P7	80 aa		6.52	□□□□□ -1.37
RSC30	YHR056C	ESL1	P40456	1118 aa		6.52	□□□□□ -1.37
RSC30	YHR056C	BDP1	P46678	594 aa		6.52	□□□□□ -1.37
RSC30	YHR056C	MNL2	Q12205	849 aa		6.52	□□□□□ -1.37
RSC30	YHR056C	RPL8A	P17076	256 aa	Known RBP	6.51	□□□□□ -1.37
RSC30	YHR056C	HCM1	P25364	564 aa		6.51	□□□□□ -1.37
RSC30	YHR056C	SPN1	Q06505	410 aa	Predicted RBP	6.51	□□□□□ -1.37
RSC30	YHR056C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	6.51	□□□□□ -1.37	not detected
RSC30	YHR056C	CAN1	P04817	590 aa		6.51	□□□□□ -1.37
RSC30	YHR056C	PUP3	P25451	205 aa	Known RBP	6.51	□□□□□ -1.37
RSC30	YHR056C	PAN5	P38787	379 aa		6.51	□□□□□ -1.37
RSC30	YHR056C	GCV2	P49095	1034 aa		6.51	□□□□□ -1.37
RSC30	YHR056C	HIF1	Q12373	385 aa		6.51	□□□□□ -1.37
RSC30	YHR056C	DRE2	P36152	348 aa		6.5	□□□□□ -1.37
RSC30	YHR056C	YHR202W	P38887	602 aa		6.5	□□□□□ -1.37
RSC30	YHR056C	RRD2	Q12461	358 aa		6.5	□□□□□ -1.37
RSC30	YHR056C	CHO2	P05374	869 aa	Known RBP	6.5	□□□□□ -1.37
RSC30	YHR056C	MAK31	P23059	88 aa		6.5	□□□□□ -1.37
RSC30	YHR056C	MAP2	P38174	421 aa	Known RBP	6.5	□□□□□ -1.37
RSC30	YHR056C	FAF1	P40546	346 aa	Predicted RBP	6.5	□□□□□ -1.37
RSC30	YHR056C	PRC1	P00729	532 aa		6.49	□□□□□ -1.37
RSC30	YHR056C	SRP54	P20424	541 aa	Known RBP	6.49	□□□□□ -1.37
RSC30	YHR056C	MRF1	P30775	413 aa	Predicted RBP	6.49	□□□□□ -1.37
RSC30	YHR056C	PEX28	P38848	579 aa		6.49	□□□□□ -1.37
RSC30	YHR056C	ZPR1	P53303	486 aa	Known RBP	6.49	□□□□□ -1.37
RSC30	YHR056C	CNM67	P53865	581 aa	Known RBP	6.49	□□□□□ -1.37
RSC30	YHR056C	DSE3	Q08729	430 aa		6.49	□□□□□ -1.37
RSC30	YHR056C	ADE2	P21264	571 aa	Known RBP	6.49	□□□□□ -1.37
RSC30	YHR056C	ALT2	P52892	507 aa		6.49	□□□□□ -1.37
RSC30	YHR056C	PNG1	Q02890	363 aa		6.49	□□□□□ -1.37
RSC30	YHR056C	SGO1	Q08490	590 aa		6.49	□□□□□ -1.37
RSC30	YHR056C	RVB2	Q12464	471 aa	Known RBP	6.49	□□□□□ -1.37
RSC30	YHR056C	PCD1	Q12524	340 aa		6.49	□□□□□ -1.37
RSC30	YHR056C	CDC16	P09798	840 aa		6.48	□□□□□ -1.37
RSC30	YHR056C	PHM6	Q05637	104 aa		6.48	□□□□□ -1.37
RSC30	YHR056C	SUE1	Q06524	206 aa		6.48	□□□□□ -1.37
RSC30	YHR056C	SEC21	P32074	935 aa	Known RBP	6.48	□□□□□ -1.37
RSC30	YHR056C	EFT1	P32324	842 aa	Known RBP	6.48	□□□□□ -1.37
RSC30	YHR056C	RFS1	P38234	210 aa	Known RBP	6.48	□□□□□ -1.37
RSC30	YHR056C	APM2	P38700	605 aa		6.48	□□□□□ -1.37
RSC30	YHR056C	YNL134C	P53912	376 aa	Known RBP	6.48	□□□□□ -1.37
RSC30	YHR056C	HDA1	P53973	706 aa		6.48	□□□□□ -1.37
RSC30	YHR056C	OYE2	Q03558	400 aa	Known RBP	6.48	□□□□□ -1.37
RSC30	YHR056C	SNF1	P06782	633 aa	Known RBP	6.47	□□□□□ -1.37
RSC30	YHR056C	APE1	P14904	514 aa		6.47	□□□□□ -1.37
RSC30	YHR056C	MUK1	Q02866	612 aa		6.47	□□□□□ -1.37
RSC30	YHR056C	YLR422W	Q06409	1932 aa		6.47	□□□□□ -1.37
RSC30	YHR056C	PGK1	P00560	416 aa	Known RBP	6.47	□□□□□ -1.37
RSC30	YHR056C	HMG2	P12684	1045 aa		6.47	□□□□□ -1.37
RSC30	YHR056C	SRO9	P25567	434 aa	Known RBP	6.47	□□□□□ -1.37
RSC30	YHR056C	MRPS35	P53292	345 aa		6.47	□□□□□ -1.37
RSC30	YHR056C	GDE1	Q02979	1223 aa		6.47	□□□□□ -1.37
RSC30	YHR056C	TRP2	P00899	507 aa	Known RBP	6.46	□□□□□ -1.37
RSC30	YHR056C	ADK2	P26364	225 aa		6.46	□□□□□ -1.37
RSC30	YHR056C	YHL026C	P38740	315 aa		6.46	□□□□□ -1.37
RSC30	YHR056C	FMO1	P38866	432 aa		6.46	□□□□□ -1.37
RSC30	YHR056C	YTA12	P40341	825 aa		6.46	□□□□□ -1.37
RSC30	YHR056C	SDH5	Q08230	162 aa		6.46	□□□□□ -1.37
RSC30	YHR056C	TPM1	P17536	199 aa	Known RBP	6.46	□□□□□ -1.38
RSC30	YHR056C	CCC2	P38995	1004 aa		6.46	□□□□□ -1.38
RSC30	YHR056C	FAA4	P47912	694 aa	Known RBP	6.46	□□□□□ -1.38
RSC30	YHR056C	YGR130C	P53278	816 aa		6.46	□□□□□ -1.38
RSC30	YHR056C	MRI1	Q06489	411 aa	Known RBP	6.46	□□□□□ -1.38
RSC30	YHR056C	FAB1	P34756	2278 aa		6.45	□□□□□ -1.38
RSC30	YHR056C	DID4	P36108	232 aa		6.45	□□□□□ -1.38
RSC30	YHR056C	CCT3	P39077	534 aa	Known RBP	6.45	□□□□□ -1.38
RSC30	YHR056C	PIB2	P53191	635 aa		6.45	□□□□□ -1.38

Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms