RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeastyeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP3YER151C RIM8P53179 542 aa1.63□□□□□ -2.15
UBP3YER151C ADR1P07248 1323 aa1.63□□□□□ -2.15
UBP3YER151C FAS2P19097 1887 aaKnown RBP1.63□□□□□ -2.15
UBP3YER151C NAP1P25293 417 aaKnown RBP1.63□□□□□ -2.15
UBP3YER151C PYC2P32327 1180 aaKnown RBP1.63□□□□□ -2.15
UBP3YER151C TOD6P34219 525 aa1.63□□□□□ -2.15
UBP3YER151C BOL3P39724 118 aa1.63□□□□□ -2.15
UBP3YER151C FIR1P40020 876 aa1.63□□□□□ -2.15
UBP3YER151C GCV1P48015 400 aa1.63□□□□□ -2.15
UBP3YER151C YIG1Q08956 461 aa1.63□□□□□ -2.15
UBP3YER151C LSO1Q3E827 93 aa1.63□□□□□ -2.15
UBP3YER151C HKR1P41809 1802 aa1.62□□□□□ -2.15
UBP3YER151C COBP00163 385 aa1.62□□□□□ -2.15
UBP3YER151C IRS4P36115 615 aaKnown RBP1.62□□□□□ -2.15
UBP3YER151C RIM11P38615 370 aa1.62□□□□□ -2.15
UBP3YER151C PSY2P40164 858 aa1.62□□□□□ -2.15
UBP3YER151C FET4P40988 552 aa1.62□□□□□ -2.15
UBP3YER151C HGH1P48362 394 aaKnown RBP1.62□□□□□ -2.15
UBP3YER151C DIB1Q06819 143 aaPredicted RBP1.62□□□□□ -2.15
UBP3YER151C RLF2Q12495 606 aa1.62□□□□□ -2.15
UBP3YER151C RPB10P22139 70 aa1.61□□□□□ -2.15
UBP3YER151C DUR3P33413 735 aa1.61□□□□□ -2.15
UBP3YER151C PUN1Q06991 263 aa1.61□□□□□ -2.15
UBP3YER151C YDL177CQ12257 170 aa1.61□□□□□ -2.15
UBP3YER151C YVC1Q12324 675 aa1.61□□□□□ -2.15
UBP3YER151C HTS1P07263 546 aaKnown RBP1.61□□□□□ -2.15
UBP3YER151C PRO1P32264 428 aa1.61□□□□□ -2.15
UBP3YER151C RAD55P38953 406 aa1.61□□□□□ -2.15
UBP3YER151C MSH4P40965 878 aaPredicted RBP1.61□□□□□ -2.15
UBP3YER151C MEC3Q02574 474 aa1.61□□□□□ -2.15
UBP3YER151C DOT1Q04089 582 aaKnown RBP1.61□□□□□ -2.15
UBP3YER151C TRE1Q08919 783 aa1.61□□□□□ -2.15
UBP3YER151C RPS4AP0CX35 261 aaKnown RBP1.6□□□□□ -2.15
UBP3YER151C RPS4BP0CX36 261 aaKnown RBP1.6□□□□□ -2.15
UBP3YER151C NPR1P22211 790 aa1.6□□□□□ -2.15
UBP3YER151C SHM2P37291 469 aaKnown RBP1.6□□□□□ -2.15
UBP3YER151C SAP155P43612 1002 aa1.6□□□□□ -2.15
UBP3YER151C CTF4Q01454 927 aa1.6□□□□□ -2.15
UBP3YER151C SSY1Q03770 852 aa1.6□□□□□ -2.15
UBP3YER151C CMR1Q12510 522 aaKnown RBP1.6□□□□□ -2.15
UBP3YER151C YLR358CO13565 187 aa1.6□□□□□ -2.15
UBP3YER151C SOD2P00447 233 aa1.6□□□□□ -2.15
UBP3YER151C SMC1P32908 1225 aa1.6□□□□□ -2.15
UBP3YER151C IPL1P38991 367 aa1.6□□□□□ -2.15
UBP3YER151C MRPL22P53881 309 aa1.6□□□□□ -2.15
UBP3YER151C RSC4Q02206 625 aa1.6□□□□□ -2.15
UBP3YER151C RAT1Q02792 1006 aaKnown RBP1.6□□□□□ -2.15
UBP3YER151C UBX2Q04228 584 aa1.6□□□□□ -2.15
UBP3YER151C PMD1P32634 1753 aa1.6□□□□□ -2.15
UBP3YER151C TRL1P09880 827 aaKnown RBP1.6□□□□□ -2.15
UBP3YER151C SSA4P22202 642 aaKnown RBP1.6□□□□□ -2.15
UBP3YER151C MDM1Q01846 1127 aa1.6□□□□□ -2.15
UBP3YER151C PNP1Q05788 311 aa1.6□□□□□ -2.15
UBP3YER151C KRE5P22023 1365 aa1.59□□□□□ -2.15
UBP3YER151C TIM23P32897 222 aa1.59□□□□□ -2.15
UBP3YER151C GPI13Q07830 1017 aa1.59□□□□□ -2.15
UBP3YER151C MNL2Q12205 849 aa1.59□□□□□ -2.15
UBP3YER151C YKR018CP36114 725 aa1.59□□□□□ -2.16
UBP3YER151C GTS1P40956 396 aa1.59□□□□□ -2.16
UBP3YER151C SUT1P53032 299 aaKnown RBP1.59□□□□□ -2.16
UBP3YER151C RTC1Q08281 1341 aa1.58□□□□□ -2.16
UBP3YER151C SAM35P14693 329 aa1.58□□□□□ -2.16
UBP3YER151C RRN6P32786 894 aa1.58□□□□□ -2.16
UBP3YER151C SMY2P32909 740 aaKnown RBP1.58□□□□□ -2.16
UBP3YER151C ARL1P38116 183 aaKnown RBP1.58□□□□□ -2.16
UBP3YER151C YPL277CQ08989 487 aa1.58□□□□□ -2.16
UBP3YER151C FRT1Q99332 602 aa1.58□□□□□ -2.16
UBP3YER151C PRE10P21242 288 aaKnown RBP RIP-Chip data1.58□□□□□ -2.16not detected
UBP3YER151C PTC7P38797 343 aa1.58□□□□□ -2.16
UBP3YER151C MPT5P39016 859 aaKnown RBP RIP-Chip data1.58□□□□□ -2.16not detected
UBP3YER151C MDJ2P42834 146 aa1.58□□□□□ -2.16
UBP3YER151C YGR045CP53229 120 aa1.58□□□□□ -2.16
UBP3YER151C CLU1Q03690 1277 aaKnown RBP1.58□□□□□ -2.16
UBP3YER151C TOS4Q06266 489 aa1.58□□□□□ -2.16
UBP3YER151C FLO1P32768 1537 aa1.58□□□□□ -2.16
UBP3YER151C TUS1Q06412 1307 aa1.58□□□□□ -2.16
UBP3YER151C RAD4P14736 754 aa1.57□□□□□ -2.16
UBP3YER151C ERT1P38140 529 aa1.57□□□□□ -2.16
UBP3YER151C RPO41P13433 1351 aaKnown RBP1.57□□□□□ -2.16
UBP3YER151C NNK1P36003 928 aa1.57□□□□□ -2.16
UBP3YER151C REI1P38344 393 aaPredicted RBP1.57□□□□□ -2.16
UBP3YER151C ETP1P38748 585 aaKnown RBP1.57□□□□□ -2.16
UBP3YER151C ERP5P38819 212 aa1.57□□□□□ -2.16
UBP3YER151C SLI1P53304 468 aa1.57□□□□□ -2.16
UBP3YER151C SNO2P53823 222 aa1.57□□□□□ -2.16
UBP3YER151C YDR132CQ03900 495 aa1.57□□□□□ -2.16
UBP3YER151C SEC3P33332 1336 aaKnown RBP1.57□□□□□ -2.16
UBP3YER151C CTT1P06115 562 aa1.56□□□□□ -2.16
UBP3YER151C QDR1P40475 563 aa1.56□□□□□ -2.16
UBP3YER151C SNM1P40993 198 aa1.56□□□□□ -2.16
UBP3YER151C IMH1Q06704 911 aaKnown RBP1.56□□□□□ -2.16
UBP3YER151C ALG6Q12001 544 aaKnown RBP1.56□□□□□ -2.16
UBP3YER151C RPS13P05756 151 aaKnown RBP1.56□□□□□ -2.16
UBP3YER151C TY1A-LR4P0C2I8 440 aaKnown RBP1.56□□□□□ -2.16
UBP3YER151C TY1A-DR6P0CX70 440 aa1.56□□□□□ -2.16
UBP3YER151C TY1A-ER1P0CX71 440 aa1.56□□□□□ -2.16
UBP3YER151C TY1A-LR2P0CX72 440 aa1.56□□□□□ -2.16
UBP3YER151C TY1A-PLP0CX73 440 aa1.56□□□□□ -2.16
UBP3YER151C TY1A-JR1P0CX74 440 aa1.56□□□□□ -2.16
UBP3YER151C TY1A-LR3P0CX75 440 aa1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms