RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAF1	YBR280C	PNG1	Q02890	363 aa		5.27	□□□□□ -1.57
SAF1	YBR280C	ECM16	Q04217	1267 aa	Known RBP	5.27	□□□□□ -1.57
SAF1	YBR280C	MAG2	Q06436	670 aa	Known RBP	5.27	□□□□□ -1.57
SAF1	YBR280C	GPI13	Q07830	1017 aa		5.27	□□□□□ -1.57
SAF1	YBR280C	SES1	P07284	462 aa	Known RBP	5.27	□□□□□ -1.57
SAF1	YBR280C	MSD1	P15179	658 aa	Known RBP	5.27	□□□□□ -1.57
SAF1	YBR280C	MSS51	P32335	436 aa		5.27	□□□□□ -1.57
SAF1	YBR280C	TVP38	P36164	337 aa		5.27	□□□□□ -1.57
SAF1	YBR280C	HMF1	P40037	129 aa	Known RBP	5.27	□□□□□ -1.57
SAF1	YBR280C	SPO71	Q03868	1245 aa		5.27	□□□□□ -1.57
SAF1	YBR280C	LCD1	Q04377	747 aa		5.27	□□□□□ -1.57
SAF1	YBR280C	TFC6	Q06339	672 aa		5.27	□□□□□ -1.57
SAF1	YBR280C	DSE3	Q08729	430 aa		5.27	□□□□□ -1.57
SAF1	YBR280C	RIM20	Q12033	661 aa		5.27	□□□□□ -1.57
SAF1	YBR280C	RAD59	Q12223	238 aa		5.27	□□□□□ -1.57
SAF1	YBR280C	FAB1	P34756	2278 aa		5.26	□□□□□ -1.57
SAF1	YBR280C	PRC1	P00729	532 aa		5.26	□□□□□ -1.57
SAF1	YBR280C	DRE2	P36152	348 aa		5.26	□□□□□ -1.57
SAF1	YBR280C	PAN5	P38787	379 aa		5.26	□□□□□ -1.57
SAF1	YBR280C	FAF1	P40546	346 aa	Predicted RBP	5.26	□□□□□ -1.57
SAF1	YBR280C	SAD1	P43589	448 aa		5.26	□□□□□ -1.57
SAF1	YBR280C	ALG2	P43636	503 aa		5.26	□□□□□ -1.57
SAF1	YBR280C	CUS1	Q02554	436 aa	Predicted RBP	5.26	□□□□□ -1.57
SAF1	YBR280C	SVF1	Q05515	481 aa		5.26	□□□□□ -1.57
SAF1	YBR280C	MMR1	Q06324	491 aa		5.26	□□□□□ -1.57
SAF1	YBR280C	CLB5	P30283	435 aa		5.25	□□□□□ -1.57
SAF1	YBR280C	SUV3	P32580	737 aa		5.25	□□□□□ -1.57
SAF1	YBR280C	NKP2	Q06162	153 aa		5.25	□□□□□ -1.57
SAF1	YBR280C	OXR1	Q08952	273 aa		5.25	□□□□□ -1.57
SAF1	YBR280C	IMP2'	P32351	346 aa		5.25	□□□□□ -1.57
SAF1	YBR280C	DID4	P36108	232 aa		5.25	□□□□□ -1.57
SAF1	YBR280C	APN2	P38207	520 aa		5.25	□□□□□ -1.57
SAF1	YBR280C	SUL1	P38359	859 aa		5.25	□□□□□ -1.57
SAF1	YBR280C	STB5	P38699	743 aa		5.25	□□□□□ -1.57
SAF1	YBR280C	YEL025C	P39991	1188 aa		5.25	□□□□□ -1.57
SAF1	YBR280C	ASE1	P50275	885 aa		5.25	□□□□□ -1.57
SAF1	YBR280C	ART5	P53244	586 aa	Known RBP	5.25	□□□□□ -1.57
SAF1	YBR280C	ARP6	Q12509	438 aa		5.25	□□□□□ -1.57
SAF1	YBR280C	YOR111W	Q99210	232 aa		5.25	□□□□□ -1.57
SAF1	YBR280C	RME1	P32338	300 aa	Known RBP	5.24	□□□□□ -1.57
SAF1	YBR280C	SLX1	P38324	304 aa		5.24	□□□□□ -1.57
SAF1	YBR280C	MDR1	P53258	950 aa		5.24	□□□□□ -1.57
SAF1	YBR280C	WHI4	Q07655	649 aa	Known RBP	5.24	□□□□□ -1.57
SAF1	YBR280C	UBC1	P21734	215 aa	Known RBP	5.23	□□□□□ -1.57
SAF1	YBR280C	SIS1	P25294	352 aa	Known RBP	5.23	□□□□□ -1.57
SAF1	YBR280C	PPZ1	P26570	692 aa		5.23	□□□□□ -1.57
SAF1	YBR280C	HUL4	P40985	892 aa		5.23	□□□□□ -1.57
SAF1	YBR280C	MUK1	Q02866	612 aa		5.23	□□□□□ -1.57
SAF1	YBR280C	YLR455W	Q06188	304 aa		5.23	□□□□□ -1.57
SAF1	YBR280C	CIT1	P00890	479 aa		5.23	□□□□□ -1.57
SAF1	YBR280C	VAS1	P07806	1104 aa	Known RBP	5.23	□□□□□ -1.57
SAF1	YBR280C	AAP1	P37898	856 aa	Known RBP	5.23	□□□□□ -1.57
SAF1	YBR280C	ISW1	P38144	1129 aa		5.23	□□□□□ -1.57
SAF1	YBR280C	EST2	Q06163	884 aa		5.23	□□□□□ -1.57
SAF1	YBR280C	FPR4	Q06205	392 aa	Predicted RBP	5.23	□□□□□ -1.57
SAF1	YBR280C	CRD1	Q07560	283 aa		5.23	□□□□□ -1.57
SAF1	YBR280C	PGA3	Q12746	312 aa	Known RBP	5.23	□□□□□ -1.57
SAF1	YBR280C	RNR3	P21672	869 aa	Known RBP	5.22	□□□□□ -1.57
SAF1	YBR280C	MBR1	P23493	339 aa		5.22	□□□□□ -1.57
SAF1	YBR280C	CIC1	P38779	376 aa	Known RBP	5.22	□□□□□ -1.57
SAF1	YBR280C	BUD16	P39988	312 aa		5.22	□□□□□ -1.57
SAF1	YBR280C	GCV2	P49095	1034 aa		5.22	□□□□□ -1.57
SAF1	YBR280C	NUM1	Q00402	2748 aa		5.22	□□□□□ -1.57
SAF1	YBR280C	CDC48	P25694	835 aa	Known RBP	5.21	□□□□□ -1.57
SAF1	YBR280C	UBP11	P36026	717 aa		5.21	□□□□□ -1.57
SAF1	YBR280C	ACF4	P47129	309 aa		5.21	□□□□□ -1.57
SAF1	YBR280C	ZPR1	P53303	486 aa	Known RBP	5.21	□□□□□ -1.57
SAF1	YBR280C	ORC4	P54791	529 aa		5.21	□□□□□ -1.57
SAF1	YBR280C	YDR341C	Q05506	607 aa	Known RBP	5.21	□□□□□ -1.57
SAF1	YBR280C	PIG1	Q06216	648 aa		5.21	□□□□□ -1.57
SAF1	YBR280C	TIF1	P10081	395 aa	Known RBP	5.21	□□□□□ -1.58
SAF1	YBR280C	KEX2	P13134	814 aa		5.21	□□□□□ -1.58
SAF1	YBR280C	ADK2	P26364	225 aa		5.21	□□□□□ -1.58
SAF1	YBR280C	COQ8	P27697	501 aa		5.21	□□□□□ -1.58
SAF1	YBR280C	PEP3	P27801	918 aa		5.21	□□□□□ -1.58
SAF1	YBR280C	PRS1	P32895	427 aa	Known RBP	5.21	□□□□□ -1.58
SAF1	YBR280C	APM2	P38700	605 aa		5.21	□□□□□ -1.58
SAF1	YBR280C	OYE2	Q03558	400 aa	Known RBP	5.21	□□□□□ -1.58
SAF1	YBR280C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
SAF1	YBR280C	ESS1	P22696	170 aa		5.2	□□□□□ -1.58
SAF1	YBR280C	RFS1	P38234	210 aa	Known RBP	5.2	□□□□□ -1.58
SAF1	YBR280C	YFL052W	P43551	465 aa		5.2	□□□□□ -1.58
SAF1	YBR280C	GDE1	Q02979	1223 aa		5.2	□□□□□ -1.58
SAF1	YBR280C	FKS1	P38631	1876 aa	Known RBP	5.2	□□□□□ -1.58
SAF1	YBR280C	PGK1	P00560	416 aa	Known RBP	5.19	□□□□□ -1.58
SAF1	YBR280C	TPM1	P17536	199 aa	Known RBP	5.19	□□□□□ -1.58
SAF1	YBR280C	IMG2	P25642	146 aa	Predicted RBP	5.19	□□□□□ -1.58
SAF1	YBR280C	BUD2	P33314	1104 aa		5.19	□□□□□ -1.58
SAF1	YBR280C	CCC2	P38995	1004 aa		5.19	□□□□□ -1.58
SAF1	YBR280C	YTA12	P40341	825 aa		5.19	□□□□□ -1.58
SAF1	YBR280C	YGR273C	P53329	174 aa		5.19	□□□□□ -1.58
SAF1	YBR280C	YNL134C	P53912	376 aa	Known RBP	5.19	□□□□□ -1.58
SAF1	YBR280C	PHM6	Q05637	104 aa		5.19	□□□□□ -1.58
SAF1	YBR280C	IRC10	Q08118	586 aa		5.19	□□□□□ -1.58
SAF1	YBR280C	SGO1	Q08490	590 aa		5.19	□□□□□ -1.58
SAF1	YBR280C	RIF1	P29539	1916 aa		5.19	□□□□□ -1.58
SAF1	YBR280C	MET6	P05694	767 aa	Known RBP	5.19	□□□□□ -1.58
SAF1	YBR280C	BET2	P20133	325 aa		5.19	□□□□□ -1.58
SAF1	YBR280C	EFT1	P32324	842 aa	Known RBP	5.19	□□□□□ -1.58
SAF1	YBR280C	MRPL7	P36519	292 aa		5.19	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms