RNA–Protein interactions for RNA: YBR186W

PCH2, Transcript of Hexameric ring ATPase that remodels chromosome axis protein Hop1p, yeastyeast

Gene PCH2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCH2YBR186W CCM1P48237 864 aaPredicted RBP12.78□□□□□ -0.36
PCH2YBR186W UBA2P52488 636 aa12.78□□□□□ -0.36
PCH2YBR186W URH1Q04179 340 aa12.78□□□□□ -0.36
PCH2YBR186W DAS2Q12084 232 aa12.78□□□□□ -0.36
PCH2YBR186W OM45P16547 393 aa12.77□□□□□ -0.36
PCH2YBR186W RIT1P23796 513 aa12.77□□□□□ -0.36
PCH2YBR186W SIP3P38717 1229 aa12.77□□□□□ -0.36
PCH2YBR186W YHL050CP38721 697 aa12.77□□□□□ -0.36
PCH2YBR186W APL5Q08951 932 aaKnown RBP12.77□□□□□ -0.36
PCH2YBR186W GCG1P32656 232 aaKnown RBP12.77□□□□□ -0.37
PCH2YBR186W YKL091CP33324 310 aaKnown RBP12.77□□□□□ -0.37
PCH2YBR186W PRP42Q03776 544 aaKnown RBP12.77□□□□□ -0.37
PCH2YBR186W TRS120Q04183 1289 aa12.77□□□□□ -0.37
PCH2YBR186W MYO5Q04439 1219 aaKnown RBP12.77□□□□□ -0.37
PCH2YBR186W TUF1P02992 437 aaKnown RBP12.76□□□□□ -0.37
PCH2YBR186W STI1P15705 589 aaKnown RBP RIP-Chip data12.76□□□□□ -0.37not detected
PCH2YBR186W CDC10P25342 322 aaKnown RBP12.76□□□□□ -0.37
PCH2YBR186W STT3P39007 718 aaKnown RBP12.76□□□□□ -0.37
PCH2YBR186W TOS4Q06266 489 aa12.76□□□□□ -0.37
PCH2YBR186W SMC6Q12749 1114 aa12.76□□□□□ -0.37
PCH2YBR186W THR4P16120 514 aaKnown RBP12.75□□□□□ -0.37
PCH2YBR186W YKR075CP36155 307 aa12.75□□□□□ -0.37
PCH2YBR186W RPS0BP46654 252 aaKnown RBP12.75□□□□□ -0.37
PCH2YBR186W RPT6Q01939 405 aaKnown RBP12.75□□□□□ -0.37
PCH2YBR186W YPL216WQ08964 1102 aa12.75□□□□□ -0.37
PCH2YBR186W CIT1P00890 479 aa12.74□□□□□ -0.37
PCH2YBR186W ARG4P04076 463 aaPredicted RBP12.74□□□□□ -0.37
PCH2YBR186W YGR153WP48238 217 aa12.74□□□□□ -0.37
PCH2YBR186W PDB1P32473 366 aaKnown RBP12.73□□□□□ -0.37
PCH2YBR186W KIC1P38692 1080 aa12.73□□□□□ -0.37
PCH2YBR186W SET5P38890 526 aaKnown RBP12.73□□□□□ -0.37
PCH2YBR186W THI6P41835 540 aa12.73□□□□□ -0.37
PCH2YBR186W BTN2P53286 410 aa12.73□□□□□ -0.37
PCH2YBR186W SDA1P53313 767 aaKnown RBP12.73□□□□□ -0.37
PCH2YBR186W FOX2Q02207 900 aaKnown RBP12.73□□□□□ -0.37
PCH2YBR186W FOB1O13329 566 aa12.73□□□□□ -0.37
PCH2YBR186W GAL11P19659 1081 aa12.73□□□□□ -0.37
PCH2YBR186W ARG1P22768 420 aa12.73□□□□□ -0.37
PCH2YBR186W RPC53P25441 422 aa12.73□□□□□ -0.37
PCH2YBR186W PRP40P33203 583 aaKnown RBP12.73□□□□□ -0.37
PCH2YBR186W UBC6P33296 250 aaPredicted RBP12.73□□□□□ -0.37
PCH2YBR186W HOT1Q03213 719 aa12.73□□□□□ -0.37
PCH2YBR186W IMH1Q06704 911 aaKnown RBP12.73□□□□□ -0.37
PCH2YBR186W DPH6Q12429 685 aa12.73□□□□□ -0.37
PCH2YBR186W TUP1P16649 713 aa12.72□□□□□ -0.37
PCH2YBR186W PTK1P36002 662 aaPredicted RBP12.72□□□□□ -0.37
PCH2YBR186W YKR018CP36114 725 aa12.72□□□□□ -0.37
PCH2YBR186W DOT5P40553 215 aa12.72□□□□□ -0.37
PCH2YBR186W UBX2Q04228 584 aa12.72□□□□□ -0.37
PCH2YBR186W SIL1Q08199 421 aa12.72□□□□□ -0.37
PCH2YBR186W SQT1P35184 431 aa12.71□□□□□ -0.37
PCH2YBR186W PET10P36139 283 aa12.71□□□□□ -0.37
PCH2YBR186W SGM1P47166 707 aa12.71□□□□□ -0.37
PCH2YBR186W NCS2P53923 493 aaPredicted RBP12.71□□□□□ -0.37
PCH2YBR186W ADA2Q02336 434 aa12.71□□□□□ -0.37
PCH2YBR186W SLK19Q08581 821 aaKnown RBP12.71□□□□□ -0.37
PCH2YBR186W ZRT2Q12436 422 aa12.71□□□□□ -0.37
PCH2YBR186W MAK11P20484 414 aaKnown RBP12.7□□□□□ -0.38
PCH2YBR186W PRO3P32263 286 aaKnown RBP12.7□□□□□ -0.38
PCH2YBR186W LOS1P33418 1100 aaPredicted RBP12.7□□□□□ -0.38
PCH2YBR186W CCT2P39076 527 aaKnown RBP12.7□□□□□ -0.38
PCH2YBR186W ICP55P40051 511 aa12.7□□□□□ -0.38
PCH2YBR186W YJR039WP47107 1121 aa12.7□□□□□ -0.38
PCH2YBR186W ILM1P47155 203 aa12.7□□□□□ -0.38
PCH2YBR186W SMD2Q06217 110 aaKnown RBP12.7□□□□□ -0.38
PCH2YBR186W CSR1Q06705 408 aaKnown RBP12.7□□□□□ -0.38
PCH2YBR186W GRE2Q12068 342 aaKnown RBP12.7□□□□□ -0.38
PCH2YBR186W RIO1Q12196 484 aaKnown RBP12.7□□□□□ -0.38
PCH2YBR186W NUC1P08466 329 aa12.7□□□□□ -0.38
PCH2YBR186W SSB1P11484 613 aaKnown RBP12.7□□□□□ -0.38
PCH2YBR186W MIP1P15801 1254 aa12.7□□□□□ -0.38
PCH2YBR186W OAF3P36023 863 aa12.7□□□□□ -0.38
PCH2YBR186W SPL2P38839 148 aa12.7□□□□□ -0.38
PCH2YBR186W SSB2P40150 613 aaKnown RBP12.7□□□□□ -0.38
PCH2YBR186W RET3P53600 189 aa12.7□□□□□ -0.38
PCH2YBR186W RAD61Q99359 647 aa12.7□□□□□ -0.38
PCH2YBR186W KRS1P15180 591 aaKnown RBP12.69□□□□□ -0.38
PCH2YBR186W SEC14P24280 304 aaKnown RBP12.69□□□□□ -0.38
PCH2YBR186W XRS2P33301 854 aa12.69□□□□□ -0.38
PCH2YBR186W VID27P40157 782 aa12.69□□□□□ -0.38
PCH2YBR186W ZPR1P53303 486 aaKnown RBP12.69□□□□□ -0.38
PCH2YBR186W ECI1Q05871 280 aa12.69□□□□□ -0.38
PCH2YBR186W RPB2P08518 1224 aaKnown RBP12.68□□□□□ -0.38
PCH2YBR186W MDL2P33311 773 aa12.68□□□□□ -0.38
PCH2YBR186W JNM1P36224 373 aa12.68□□□□□ -0.38
PCH2YBR186W RPC17P47076 161 aa12.68□□□□□ -0.38
PCH2YBR186W TAD1P53065 400 aa12.68□□□□□ -0.38
PCH2YBR186W TOF1P53840 1238 aa12.68□□□□□ -0.38
PCH2YBR186W TY4A-HQ6Q5P6 413 aa12.68□□□□□ -0.38
PCH2YBR186W RAD3P06839 778 aa12.67□□□□□ -0.38
PCH2YBR186W PYC1P11154 1178 aaKnown RBP12.67□□□□□ -0.38
PCH2YBR186W RAD5P32849 1169 aaPredicted RBP12.67□□□□□ -0.38
PCH2YBR186W MCD4P36051 919 aa12.67□□□□□ -0.38
PCH2YBR186W YNL320WP42840 284 aa12.67□□□□□ -0.38
PCH2YBR186W YJR142WP47173 342 aa12.67□□□□□ -0.38
PCH2YBR186W RAT1Q02792 1006 aaKnown RBP12.67□□□□□ -0.38
PCH2YBR186W ADY4Q05955 493 aa12.67□□□□□ -0.38
PCH2YBR186W LCB5Q06147 687 aaKnown RBP12.67□□□□□ -0.38
PCH2YBR186W MLH2Q07980 695 aa12.67□□□□□ -0.38
PCH2YBR186W SMC1P32908 1225 aa12.67□□□□□ -0.38
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms