RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 HELBQ8NG08 1087 aaPredicted RBP5.82□□□□□ -1.48
LINC01109-201ENST00000603837 TSPAN18Q96SJ8 248 aa5.82□□□□□ -1.48
LINC01109-201ENST00000603837 TMUB1Q9BVT8 246 aa5.82□□□□□ -1.48
LINC01109-201ENST00000603837 HPS5Q9UPZ3 1129 aa5.82□□□□□ -1.48
LINC01109-201ENST00000603837 CCDC189A1A4V9 331 aa5.81□□□□□ -1.48
LINC01109-201ENST00000603837 LMNB1P20700 586 aa5.81□□□□□ -1.48
LINC01109-201ENST00000603837 KCNJ4P48050 445 aa5.81□□□□□ -1.48
LINC01109-201ENST00000603837 PTPN5P54829 565 aa5.81□□□□□ -1.48
LINC01109-201ENST00000603837 NUTM2GQ5VZR2 741 aa5.81□□□□□ -1.48
LINC01109-201ENST00000603837 CLEC4GQ6UXB4 293 aa5.81□□□□□ -1.48
LINC01109-201ENST00000603837 GAS2L2Q8NHY3 880 aa5.81□□□□□ -1.48
LINC01109-201ENST00000603837 CXorf38Q8TB03 319 aa5.81□□□□□ -1.48
LINC01109-201ENST00000603837 YY1AP1Q9H869 796 aa5.81□□□□□ -1.48
LINC01109-201ENST00000603837 METTL14Q9HCE5 456 aaKnown RBP5.81□□□□□ -1.48
LINC01109-201ENST00000603837 CTTNBP2Q8WZ74 1663 aa5.81□□□□□ -1.48
LINC01109-201ENST00000603837 BDNFP23560 247 aa5.81□□□□□ -1.48
LINC01109-201ENST00000603837 PPP4CP60510 307 aa5.81□□□□□ -1.48
LINC01109-201ENST00000603837 CBX1P83916 185 aa5.81□□□□□ -1.48
LINC01109-201ENST00000603837 RDH13Q8NBN7 331 aa5.81□□□□□ -1.48
LINC01109-201ENST00000603837 CHMP7Q8WUX9 453 aaPredicted RBP5.81□□□□□ -1.48
LINC01109-201ENST00000603837 TSR3Q9UJK0 312 aaKnown RBP5.81□□□□□ -1.48
LINC01109-201ENST00000603837 SBNO2Q9Y2G9 1366 aa5.81□□□□□ -1.48
LINC01109-201ENST00000603837 RNF123Q5XPI4 1314 aa5.81□□□□□ -1.48
LINC01109-201ENST00000603837 GOLIM4O00461 696 aa5.8□□□□□ -1.48
LINC01109-201ENST00000603837 U2SURPO15042 1029 aaKnown RBP5.8□□□□□ -1.48
LINC01109-201ENST00000603837 SREK1Q8WXA9 508 aaKnown RBP5.8□□□□□ -1.48
LINC01109-201ENST00000603837 ZBTB9Q96C00 473 aa5.8□□□□□ -1.48
LINC01109-201ENST00000603837 FAM217BQ9NTX9 383 aaPredicted RBP5.8□□□□□ -1.48
LINC01109-201ENST00000603837 GEMIN8Q9NWZ8 242 aaKnown RBP5.8□□□□□ -1.48
LINC01109-201ENST00000603837 AMOTL2Q9Y2J4 779 aa5.8□□□□□ -1.48
LINC01109-201ENST00000603837 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.8□□□□□ -1.48
LINC01109-201ENST00000603837 SSTR3P32745 418 aaPredicted RBP5.8□□□□□ -1.48
LINC01109-201ENST00000603837 APLP1P51693 650 aa5.8□□□□□ -1.48
LINC01109-201ENST00000603837 GRPEL1Q9HAV7 217 aa5.8□□□□□ -1.48
LINC01109-201ENST00000603837 KLF15Q9UIH9 416 aa5.8□□□□□ -1.48
LINC01109-201ENST00000603837 CCDC194A0A1B0GVG4 234 aa5.8□□□□□ -1.48
LINC01109-201ENST00000603837 SLC10A3P09131 477 aa5.8□□□□□ -1.48
LINC01109-201ENST00000603837 MSNP26038 577 aaKnown RBP5.8□□□□□ -1.48
LINC01109-201ENST00000603837 WBP1LQ9NX94 342 aa5.8□□□□□ -1.48
LINC01109-201ENST00000603837 MKRN1Q9UHC7 482 aaKnown RBP5.8□□□□□ -1.48
LINC01109-201ENST00000603837 FRMD4BQ9Y2L6 1034 aa5.8□□□□□ -1.48
LINC01109-201ENST00000603837 EFCAB5A4FU69 1503 aa5.8□□□□□ -1.48
LINC01109-201ENST00000603837 SMG6Q86US8 1419 aaKnown RBP5.79□□□□□ -1.48
LINC01109-201ENST00000603837 ZNF771Q7L3S4 317 aaPredicted RBP5.79□□□□□ -1.48
LINC01109-201ENST00000603837 ZSCAN30Q86W11 494 aa5.79□□□□□ -1.48
LINC01109-201ENST00000603837 LRRIQ1Q96JM4 1722 aa5.79□□□□□ -1.48
LINC01109-201ENST00000603837 DIP2BQ9P265 1576 aa5.79□□□□□ -1.48
LINC01109-201ENST00000603837 NBPF9Q3BBW0 867 aa5.79□□□□□ -1.48
LINC01109-201ENST00000603837 HSP90AB3PQ58FF7 597 aa5.79□□□□□ -1.48
LINC01109-201ENST00000603837 PUF60Q9UHX1 559 aaKnown RBP5.79□□□□□ -1.48
LINC01109-201ENST00000603837 NRBP1Q9UHY1 535 aa5.79□□□□□ -1.48
LINC01109-201ENST00000603837 PCF11O94913 1555 aaKnown RBP5.79□□□□□ -1.48
LINC01109-201ENST00000603837 LRRC9Q6ZRR7 1453 aa5.78□□□□□ -1.48
LINC01109-201ENST00000603837 DPH6Q7L8W6 267 aa5.78□□□□□ -1.48
LINC01109-201ENST00000603837 SKAP1Q86WV1 359 aa5.78□□□□□ -1.48
LINC01109-201ENST00000603837 RNF217Q8TC41 542 aa5.78□□□□□ -1.48
LINC01109-201ENST00000603837 TRIM34Q9BYJ4 488 aa5.78□□□□□ -1.48
LINC01109-201ENST00000603837 CCNB3Q8WWL7 1395 aa5.78□□□□□ -1.48
LINC01109-201ENST00000603837 SAMD9Q5K651 1589 aa5.78□□□□□ -1.48
LINC01109-201ENST00000603837 LRRC27Q9C0I9 530 aa5.78□□□□□ -1.48
LINC01109-201ENST00000603837 ISY1Q9ULR0 285 aaKnown RBP5.78□□□□□ -1.48
LINC01109-201ENST00000603837 ABCC10Q5T3U5 1492 aa5.78□□□□□ -1.48
LINC01109-201ENST00000603837 PLEKHG3A1L390 1219 aa5.78□□□□□ -1.48
LINC01109-201ENST00000603837 CD46P15529 392 aa5.78□□□□□ -1.48
LINC01109-201ENST00000603837 TCF3P15923 654 aa5.78□□□□□ -1.48
LINC01109-201ENST00000603837 WDR78Q5VTH9 848 aa5.78□□□□□ -1.48
LINC01109-201ENST00000603837 ARHGEF10LQ9HCE6 1279 aa5.78□□□□□ -1.48
LINC01109-201ENST00000603837 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.78□□□□□ -1.48
LINC01109-201ENST00000603837 PRR12Q9ULL5 1215 aa5.78□□□□□ -1.48
LINC01109-201ENST00000603837 FAN1Q9Y2M0 1017 aa5.78□□□□□ -1.48
LINC01109-201ENST00000603837 ERCC6L2Q5T890 1561 aa5.77□□□□□ -1.49
LINC01109-201ENST00000603837 CFHP08603 1231 aa5.77□□□□□ -1.49
LINC01109-201ENST00000603837 ERCC3P19447 782 aa5.77□□□□□ -1.49
LINC01109-201ENST00000603837 TDO2P48775 406 aa5.77□□□□□ -1.49
LINC01109-201ENST00000603837 GYS2P54840 703 aa5.77□□□□□ -1.49
LINC01109-201ENST00000603837 BECN1Q14457 450 aa5.77□□□□□ -1.49
LINC01109-201ENST00000603837 KANK4Q5T7N3 995 aaPredicted RBP5.77□□□□□ -1.49
LINC01109-201ENST00000603837 MFSD4BQ5TF39 518 aa5.77□□□□□ -1.49
LINC01109-201ENST00000603837 BANK1Q8NDB2 785 aa5.77□□□□□ -1.49
LINC01109-201ENST00000603837 GNL3LQ9NVN8 582 aaKnown RBP5.77□□□□□ -1.49
LINC01109-201ENST00000603837 HCSTQ9UBK5 93 aa5.77□□□□□ -1.49
LINC01109-201ENST00000603837 NUDCQ9Y266 331 aa5.77□□□□□ -1.49
LINC01109-201ENST00000603837 IPO8O15397 1037 aaKnown RBP5.77□□□□□ -1.49
LINC01109-201ENST00000603837 EVA1CP58658 441 aa5.77□□□□□ -1.49
LINC01109-201ENST00000603837 CSPP1Q1MSJ5 1256 aa5.77□□□□□ -1.49
LINC01109-201ENST00000603837 BEGAINQ9BUH8 593 aa5.77□□□□□ -1.49
LINC01109-201ENST00000603837 MAF1Q9H063 256 aa5.77□□□□□ -1.49
LINC01109-201ENST00000603837 DIS3Q9Y2L1 958 aaKnown RBP5.77□□□□□ -1.49
LINC01109-201ENST00000603837 FYCO1Q9BQS8 1478 aa5.77□□□□□ -1.49
LINC01109-201ENST00000603837 FHOD3Q2V2M9 1422 aa5.77□□□□□ -1.49
LINC01109-201ENST00000603837 NYAP1Q6ZVC0 841 aa5.76□□□□□ -1.49
LINC01109-201ENST00000603837 TSPYL1Q9H0U9 437 aa5.76□□□□□ -1.49
LINC01109-201ENST00000603837 MAP3K20Q9NYL2 800 aaKnown RBP5.76□□□□□ -1.49
LINC01109-201ENST00000603837 PHLDB1Q86UU1 1377 aa5.76□□□□□ -1.49
LINC01109-201ENST00000603837 MAP3K4Q9Y6R4 1608 aa5.76□□□□□ -1.49
LINC01109-201ENST00000603837 CCDC66A2RUB6 948 aa5.76□□□□□ -1.49
LINC01109-201ENST00000603837 MAP2K1Q02750 393 aaPredicted RBP5.76□□□□□ -1.49
LINC01109-201ENST00000603837 KMT5BQ4FZB7 885 aa5.76□□□□□ -1.49
LINC01109-201ENST00000603837 SASS6Q6UVJ0 657 aa5.76□□□□□ -1.49
LINC01109-201ENST00000603837 CEP120Q8N960 986 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms