RNA–Protein interactions for RNA: ENST00000525821.1

CTNND1-211, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-211ENST00000525821 DEPDC4Q8N2C3 294 aa11.44□□□□□ -0.58
CTNND1-211ENST00000525821 NOD1Q9Y239 953 aa11.44□□□□□ -0.58
CTNND1-211ENST00000525821 TARBP1Q13395 1621 aaKnown RBP11.44□□□□□ -0.58
CTNND1-211ENST00000525821 DNMBPQ6XZF7 1577 aa11.44□□□□□ -0.58
CTNND1-211ENST00000525821 SNAPC4Q5SXM2 1469 aa11.44□□□□□ -0.58
CTNND1-211ENST00000525821 ABCC8Q09428 1581 aa11.43□□□□□ -0.58
CTNND1-211ENST00000525821 CNKSR1Q969H4 720 aa11.43□□□□□ -0.58
CTNND1-211ENST00000525821 XAGE2Q96GT9 111 aa11.43□□□□□ -0.58
CTNND1-211ENST00000525821 ESYT1Q9BSJ8 1104 aa11.43□□□□□ -0.58
CTNND1-211ENST00000525821 CLASP1Q7Z460 1538 aa11.43□□□□□ -0.58
CTNND1-211ENST00000525821 POLA1P09884 1462 aaPredicted RBP11.43□□□□□ -0.58
CTNND1-211ENST00000525821 IL2RAP01589 272 aa11.42□□□□□ -0.58
CTNND1-211ENST00000525821 ESCO1Q5FWF5 840 aa11.42□□□□□ -0.58
CTNND1-211ENST00000525821 LYSMD3Q7Z3D4 306 aa11.42□□□□□ -0.58
CTNND1-211ENST00000525821 PLEKHM2Q8IWE5 1019 aa11.42□□□□□ -0.58
CTNND1-211ENST00000525821 NPAS3Q8IXF0 933 aa11.42□□□□□ -0.58
CTNND1-211ENST00000525821 TFIP11Q9UBB9 837 aaKnown RBP11.42□□□□□ -0.58
CTNND1-211ENST00000525821 PTSQ03393 145 aa11.41□□□□□ -0.58
CTNND1-211ENST00000525821 ETNK1Q9HBU6 452 aa11.41□□□□□ -0.58
CTNND1-211ENST00000525821 PCDHGA11Q9Y5H2 935 aa11.41□□□□□ -0.58
CTNND1-211ENST00000525821 USP17L3A6NCW0 530 aa11.4□□□□□ -0.58
CTNND1-211ENST00000525821 USP17L4A6NCW7 530 aa11.4□□□□□ -0.58
CTNND1-211ENST00000525821 STAU1O95793 577 aaKnown RBP11.4□□□□□ -0.58
CTNND1-211ENST00000525821 CENPCQ03188 943 aa11.4□□□□□ -0.58
CTNND1-211ENST00000525821 NFX1Q12986 1120 aaKnown RBP11.4□□□□□ -0.58
CTNND1-211ENST00000525821 SLC27A3Q5K4L6 730 aa11.4□□□□□ -0.58
CTNND1-211ENST00000525821 USP17L2Q6R6M4 530 aa11.4□□□□□ -0.58
CTNND1-211ENST00000525821 TREML4Q6UXN2 200 aa11.4□□□□□ -0.58
CTNND1-211ENST00000525821 USP17L1Q7RTZ2 530 aa11.4□□□□□ -0.58
CTNND1-211ENST00000525821 PRICKLE2Q7Z3G6 844 aa11.4□□□□□ -0.58
CTNND1-211ENST00000525821 GRIP2Q9C0E4 1043 aa11.4□□□□□ -0.58
CTNND1-211ENST00000525821 HRH3Q9Y5N1 445 aa11.4□□□□□ -0.58
CTNND1-211ENST00000525821 SOGA1O94964 1423 aa11.4□□□□□ -0.58
CTNND1-211ENST00000525821 GAPVD1Q14C86 1478 aa11.39□□□□□ -0.59
CTNND1-211ENST00000525821 WFS1O76024 890 aa11.39□□□□□ -0.59
CTNND1-211ENST00000525821 GTF2IP78347 998 aa11.39□□□□□ -0.59
CTNND1-211ENST00000525821 PPP1R12CQ9BZL4 782 aa11.39□□□□□ -0.59
CTNND1-211ENST00000525821 PALM3A6NDB9 673 aaPredicted RBP11.38□□□□□ -0.59
CTNND1-211ENST00000525821 SCNN1DP51172 638 aa11.38□□□□□ -0.59
CTNND1-211ENST00000525821 GDF10P55107 478 aa11.38□□□□□ -0.59
CTNND1-211ENST00000525821 SLC16A10Q8TF71 515 aa11.38□□□□□ -0.59
CTNND1-211ENST00000525821 INHAP05111 366 aa11.37□□□□□ -0.59
CTNND1-211ENST00000525821 VEGFBP49765 207 aa11.37□□□□□ -0.59
CTNND1-211ENST00000525821 TRIM50Q86XT4 487 aa11.37□□□□□ -0.59
CTNND1-211ENST00000525821 MKRN1Q9UHC7 482 aaKnown RBP11.37□□□□□ -0.59
CTNND1-211ENST00000525821 MAFBQ9Y5Q3 323 aaPredicted RBP11.37□□□□□ -0.59
CTNND1-211ENST00000525821 SLC35F4A4IF30 521 aa11.36□□□□□ -0.59
CTNND1-211ENST00000525821 H3BM21 787 aa11.36□□□□□ -0.59
CTNND1-211ENST00000525821 PPFIA3O75145 1194 aa11.36□□□□□ -0.59
CTNND1-211ENST00000525821 ZSCAN10Q96SZ4 725 aaPredicted RBP11.36□□□□□ -0.59
CTNND1-211ENST00000525821 PRDM2Q13029 1718 aa11.35□□□□□ -0.59
CTNND1-211ENST00000525821 WASLO00401 505 aaPredicted RBP11.35□□□□□ -0.59
CTNND1-211ENST00000525821 RHOQP17081 205 aa11.35□□□□□ -0.59
CTNND1-211ENST00000525821 PSME1Q06323 249 aa11.35□□□□□ -0.59
CTNND1-211ENST00000525821 POU4F2Q12837 409 aa11.35□□□□□ -0.59
CTNND1-211ENST00000525821 C14orf37Q86TY3 774 aa11.35□□□□□ -0.59
CTNND1-211ENST00000525821 FHDC1Q9C0D6 1143 aaPredicted RBP11.35□□□□□ -0.59
CTNND1-211ENST00000525821 SYNJ1O43426 1573 aa11.35□□□□□ -0.59
CTNND1-211ENST00000525821 TMEM229AB2RXF0 380 aa11.34□□□□□ -0.59
CTNND1-211ENST00000525821 SPATA31C2B4DYI2 1134 aa11.34□□□□□ -0.59
CTNND1-211ENST00000525821 ATP1A2P50993 1020 aa11.34□□□□□ -0.59
CTNND1-211ENST00000525821 LCE2AQ5TA79 106 aaPredicted RBP11.34□□□□□ -0.59
CTNND1-211ENST00000525821 CCDC155Q8N6L0 562 aa11.34□□□□□ -0.59
CTNND1-211ENST00000525821 SENP3-EIF4A1A0A087X0R7 540 aa11.33□□□□□ -0.6
CTNND1-211ENST00000525821 GTF2E1P29083 439 aaPredicted RBP11.33□□□□□ -0.6
CTNND1-211ENST00000525821 TLR1Q15399 786 aa11.33□□□□□ -0.6
CTNND1-211ENST00000525821 ZBTB7BO15156 539 aaPredicted RBP11.32□□□□□ -0.6
CTNND1-211ENST00000525821 LMOD1P29536 600 aaPredicted RBP11.32□□□□□ -0.6
CTNND1-211ENST00000525821 TMEM214Q6NUQ4 689 aaKnown RBP11.32□□□□□ -0.6
CTNND1-211ENST00000525821 NBPF10Q6P3W6 841 aaKnown RBP11.32□□□□□ -0.6
CTNND1-211ENST00000525821 TAS1R3Q7RTX0 852 aa11.32□□□□□ -0.6
CTNND1-211ENST00000525821 NBPF15Q8N660 670 aa11.32□□□□□ -0.6
CTNND1-211ENST00000525821 SERTAD1Q9UHV2 236 aa11.32□□□□□ -0.6
CTNND1-211ENST00000525821 SYNJ2O15056 1496 aa11.32□□□□□ -0.6
CTNND1-211ENST00000525821 MAGI1Q96QZ7 1491 aaPredicted RBP11.32□□□□□ -0.6
CTNND1-211ENST00000525821 SMTNP53814 917 aa11.31□□□□□ -0.6
CTNND1-211ENST00000525821 CLDN10P78369 228 aa11.31□□□□□ -0.6
CTNND1-211ENST00000525821 WDR44Q5JSH3 913 aa11.31□□□□□ -0.6
CTNND1-211ENST00000525821 OGFOD1Q8N543 542 aa11.31□□□□□ -0.6
CTNND1-211ENST00000525821 IRF7Q92985 503 aa11.31□□□□□ -0.6
CTNND1-211ENST00000525821 SLC4A9Q96Q91 983 aa11.31□□□□□ -0.6
CTNND1-211ENST00000525821 DNAAF2Q9NVR5 837 aaKnown RBP11.31□□□□□ -0.6
CTNND1-211ENST00000525821 GRIN2BQ13224 1484 aa11.31□□□□□ -0.6
CTNND1-211ENST00000525821 BACH1O14867 736 aa11.3□□□□□ -0.6
CTNND1-211ENST00000525821 GNASQ5JWF2 1037 aa11.3□□□□□ -0.6
CTNND1-211ENST00000525821 CCDC102BQ68D86 513 aa11.3□□□□□ -0.6
CTNND1-211ENST00000525821 FGD5Q6ZNL6 1462 aa11.3□□□□□ -0.6
CTNND1-211ENST00000525821 ERCC6L2Q5T890 1561 aa11.29□□□□□ -0.6
CTNND1-211ENST00000525821 PPARGC1BQ86YN6 1023 aaKnown RBP11.29□□□□□ -0.6
CTNND1-211ENST00000525821 LARGE2Q8N3Y3 721 aa11.29□□□□□ -0.6
CTNND1-211ENST00000525821 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.29□□□□□ -0.6
CTNND1-211ENST00000525821 KIAA1024Q9UPX6 916 aa11.29□□□□□ -0.6
CTNND1-211ENST00000525821 RASA1P20936 1047 aa11.28□□□□□ -0.6
CTNND1-211ENST00000525821 ITGA6P23229 1130 aa11.28□□□□□ -0.6
CTNND1-211ENST00000525821 CFAP70Q5T0N1 1121 aa11.28□□□□□ -0.6
CTNND1-211ENST00000525821 KANK4Q5T7N3 995 aaPredicted RBP11.28□□□□□ -0.6
CTNND1-211ENST00000525821 LCE2CQ5TA81 110 aa11.28□□□□□ -0.6
CTNND1-211ENST00000525821 TPCN2Q8NHX9 752 aa11.28□□□□□ -0.6
CTNND1-211ENST00000525821 ZNF358Q9NW07 568 aa11.28□□□□□ -0.6
CTNND1-211ENST00000525821 DYRK1BQ9Y463 629 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms