RNA–Protein interactions for RNA: ENST00000525821.1

CTNND1-211, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-211ENST00000525821 AEBP2Q6ZN18 517 aaPredicted RBP31.97■■■□□ 2.71
CTNND1-211ENST00000525821 CHIC1Q5VXU3 224 aa31.1■■■□□ 2.57
CTNND1-211ENST00000525821 PHF23Q9BUL5 403 aaPredicted RBP27.33■■□□□ 1.97
CTNND1-211ENST00000525821 SENP3Q9H4L4 574 aaPredicted RBP27.16■■□□□ 1.94
CTNND1-211ENST00000525821 FOXD1Q16676 465 aa25.22■■□□□ 1.63
CTNND1-211ENST00000525821 PLPPR3Q6T4P5 718 aa25.21■■□□□ 1.63
CTNND1-211ENST00000525821 PPP6R1Q9UPN7 881 aa24.17■■□□□ 1.46
CTNND1-211ENST00000525821 ADRA2BP18089 450 aa24.14■■□□□ 1.45
CTNND1-211ENST00000525821 PIAS4Q8N2W9 510 aaPredicted RBP23.74■■□□□ 1.39
CTNND1-211ENST00000525821 MSH5O43196 834 aa23.31■■□□□ 1.32
CTNND1-211ENST00000525821 PPP4R3CPQ6ZMV5 832 aa22.2■■□□□ 1.14
CTNND1-211ENST00000525821 SCAF1Q9H7N4 1312 aaKnown RBP22.11■■□□□ 1.13
CTNND1-211ENST00000525821 MAPK8IP2Q13387 824 aaPredicted RBP21.94■■□□□ 1.1
CTNND1-211ENST00000525821 DMRT2Q9Y5R5 561 aa21.66■■□□□ 1.06
CTNND1-211ENST00000525821 CNKSR2Q8WXI2 1034 aa21.61■■□□□ 1.05
CTNND1-211ENST00000525821 NCBP3Q53F19 620 aaKnown RBP21.59■■□□□ 1.05
CTNND1-211ENST00000525821 KCNA4P22459 653 aa21.51■■□□□ 1.03
CTNND1-211ENST00000525821 POTEDQ86YR6 584 aa21.45■■□□□ 1.02
CTNND1-211ENST00000525821 NPM3O75607 178 aaKnown RBP21.25■□□□□ 0.99
CTNND1-211ENST00000525821 RNF216Q9NWF9 866 aaPredicted RBP21.22■□□□□ 0.99
CTNND1-211ENST00000525821 HOXD11P31277 338 aaPredicted RBP21.16■□□□□ 0.98
CTNND1-211ENST00000525821 DCAF8L1A6NGE4 600 aa20.73■□□□□ 0.91
CTNND1-211ENST00000525821 DNAJC5BQ9UF47 199 aa20.66■□□□□ 0.9
CTNND1-211ENST00000525821 SLC4A1APQ9BWU0 796 aaKnown RBP20.47■□□□□ 0.87
CTNND1-211ENST00000525821 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.17■□□□□ 0.82
CTNND1-211ENST00000525821 SLC4A2P04920 1241 aa20.09■□□□□ 0.81
CTNND1-211ENST00000525821 RNF39Q9H2S5 420 aa19.96■□□□□ 0.79
CTNND1-211ENST00000525821 FOXD4L1Q9NU39 408 aa19.85■□□□□ 0.77
CTNND1-211ENST00000525821 U3KPZ7 1027 aaPredicted RBP19.82■□□□□ 0.76
CTNND1-211ENST00000525821 ZBTB22O15209 634 aa19.77■□□□□ 0.76
CTNND1-211ENST00000525821 C1QBPQ07021 282 aaKnown RBP19.72■□□□□ 0.75
CTNND1-211ENST00000525821 EHMT2Q96KQ7 1210 aa19.72■□□□□ 0.75
CTNND1-211ENST00000525821 MYCNP04198 464 aaPredicted RBP19.64■□□□□ 0.73
CTNND1-211ENST00000525821 CSRNP3Q8WYN3 585 aa19.59■□□□□ 0.73
CTNND1-211ENST00000525821 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.55■□□□□ 0.72
CTNND1-211ENST00000525821 CACNB1Q02641 598 aaPredicted RBP19.55■□□□□ 0.72
CTNND1-211ENST00000525821 HNRNPUL2Q1KMD3 747 aaKnown RBP19.55■□□□□ 0.72
CTNND1-211ENST00000525821 SAMD1Q6SPF0 538 aaPredicted RBP19.46■□□□□ 0.71
CTNND1-211ENST00000525821 APLP2Q06481 763 aa19.37■□□□□ 0.69
CTNND1-211ENST00000525821 SPINK5Q9NQ38 1064 aaPredicted RBP19.3■□□□□ 0.68
CTNND1-211ENST00000525821 CAPN15O75808 1086 aa19.24■□□□□ 0.67
CTNND1-211ENST00000525821 ATXN8OSP0DMR3 200 aa19.18■□□□□ 0.66
CTNND1-211ENST00000525821 TRHP20396 242 aaPredicted RBP19.13■□□□□ 0.65
CTNND1-211ENST00000525821 ZNF219Q9P2Y4 722 aaPredicted RBP19.12■□□□□ 0.65
CTNND1-211ENST00000525821 ATF5Q9Y2D1 282 aaPredicted RBP19.12■□□□□ 0.65
CTNND1-211ENST00000525821 DSG3P32926 999 aa18.95■□□□□ 0.62
CTNND1-211ENST00000525821 ABCB7O75027 752 aa18.85■□□□□ 0.61
CTNND1-211ENST00000525821 POLA2Q14181 598 aa18.78■□□□□ 0.6
CTNND1-211ENST00000525821 ZBTB12Q9Y330 459 aaPredicted RBP18.47■□□□□ 0.55
CTNND1-211ENST00000525821 FBLN2P98095 1184 aa18.35■□□□□ 0.53
CTNND1-211ENST00000525821 MKRN4PQ13434 485 aaPredicted RBP18.27■□□□□ 0.52
CTNND1-211ENST00000525821 OSCARQ8IYS5 282 aa18.13■□□□□ 0.49
CTNND1-211ENST00000525821 RBM42Q9BTD8 480 aaKnown RBP18.08■□□□□ 0.48
CTNND1-211ENST00000525821 SPDYE2BA6NHP3 402 aa17.96■□□□□ 0.47
CTNND1-211ENST00000525821 SPDYE6P0CI01 402 aa17.96■□□□□ 0.47
CTNND1-211ENST00000525821 SPDYE2Q495Y8 402 aa17.96■□□□□ 0.47
CTNND1-211ENST00000525821 ZNF692Q9BU19 519 aaPredicted RBP17.87■□□□□ 0.45
CTNND1-211ENST00000525821 SPDYE4A6NLX3 237 aa17.82■□□□□ 0.44
CTNND1-211ENST00000525821 AKT1S1Q96B36 256 aa17.82■□□□□ 0.44
CTNND1-211ENST00000525821 SSUH2Q9Y2M2 353 aa17.79■□□□□ 0.44
CTNND1-211ENST00000525821 FKBP8Q14318 412 aa17.71■□□□□ 0.43
CTNND1-211ENST00000525821 REM2Q8IYK8 340 aaPredicted RBP17.65■□□□□ 0.42
CTNND1-211ENST00000525821 PABPN1Q86U42 306 aaKnown RBP eCLIP17.63■□□□□ 0.41
CTNND1-211ENST00000525821 PROM2Q8N271 834 aa17.49■□□□□ 0.39
CTNND1-211ENST00000525821 SPDYE1Q8NFV5 336 aaPredicted RBP17.47■□□□□ 0.39
CTNND1-211ENST00000525821 PITPNM1O00562 1244 aa17.43■□□□□ 0.38
CTNND1-211ENST00000525821 CLEC11AQ9Y240 323 aa17.39■□□□□ 0.37
CTNND1-211ENST00000525821 CHRDL2Q6WN34 429 aa17.36■□□□□ 0.37
CTNND1-211ENST00000525821 STAG3Q9UJ98 1225 aa17.32■□□□□ 0.36
CTNND1-211ENST00000525821 PRR29P0C7W0 189 aa17.23■□□□□ 0.35
CTNND1-211ENST00000525821 FXR2P51116 673 aaKnown RBP eCLIP17.15■□□□□ 0.34
CTNND1-211ENST00000525821 FBXO3Q9UK99 471 aa17.13■□□□□ 0.33
CTNND1-211ENST00000525821 PIP4P2Q8N4L2 257 aa17.11■□□□□ 0.33
CTNND1-211ENST00000525821 PRKAR2AP13861 404 aaKnown RBP17■□□□□ 0.31
CTNND1-211ENST00000525821 CHADLQ6NUI6 762 aa16.97■□□□□ 0.31
CTNND1-211ENST00000525821 POTEHQ6S545 545 aa16.97■□□□□ 0.31
CTNND1-211ENST00000525821 CREBZFQ9NS37 354 aa16.96■□□□□ 0.31
CTNND1-211ENST00000525821 MIER1Q8N108 512 aa16.93■□□□□ 0.3
CTNND1-211ENST00000525821 VASPP50552 380 aaPredicted RBP16.88■□□□□ 0.29
CTNND1-211ENST00000525821 PLCD3Q8N3E9 789 aa16.88■□□□□ 0.29
CTNND1-211ENST00000525821 PLEKHG5O94827 1062 aa16.86■□□□□ 0.29
CTNND1-211ENST00000525821 FARP1Q9Y4F1 1045 aaPredicted RBP16.81■□□□□ 0.28
CTNND1-211ENST00000525821 MNX1P50219 401 aaPredicted RBP16.76■□□□□ 0.27
CTNND1-211ENST00000525821 ZBTB47Q9UFB7 747 aaPredicted RBP16.7■□□□□ 0.26
CTNND1-211ENST00000525821 NPM1P06748 294 aaKnown RBP eCLIP16.69■□□□□ 0.26
CTNND1-211ENST00000525821 KLHL34Q8N239 644 aa16.65■□□□□ 0.26
CTNND1-211ENST00000525821 IFNLR1Q8IU57 520 aaPredicted RBP16.64■□□□□ 0.25
CTNND1-211ENST00000525821 HAX1O00165 279 aa16.62■□□□□ 0.25
CTNND1-211ENST00000525821 C19orf67A6NJJ6 358 aa16.56■□□□□ 0.24
CTNND1-211ENST00000525821 CD44P16070 742 aaKnown RBP16.51■□□□□ 0.23
CTNND1-211ENST00000525821 NUBP1P53384 320 aa16.49■□□□□ 0.23
CTNND1-211ENST00000525821 SPOCK2Q92563 424 aa16.49■□□□□ 0.23
CTNND1-211ENST00000525821 EVX2Q03828 476 aa16.45■□□□□ 0.22
CTNND1-211ENST00000525821 RASEFQ8IZ41 740 aa16.45■□□□□ 0.22
CTNND1-211ENST00000525821 PAK3O75914 559 aaPredicted RBP16.44■□□□□ 0.22
CTNND1-211ENST00000525821 ZRANB1Q9UGI0 708 aa16.41■□□□□ 0.22
CTNND1-211ENST00000525821 TSPYL2Q9H2G4 693 aaPredicted RBP16.4■□□□□ 0.22
CTNND1-211ENST00000525821 FAM212AQ96EL1 285 aa16.36■□□□□ 0.21
CTNND1-211ENST00000525821 DCAF8Q5TAQ9 597 aa16.34■□□□□ 0.21
CTNND1-211ENST00000525821 GSE1Q14687 1217 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms