RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 PPP2R2DQ66LE6 453 aa9.56□□□□□ -0.88
CD46-211ENST00000464082 TOP2BQ02880 1626 aa9.56□□□□□ -0.88
CD46-211ENST00000464082 ABCA5Q8WWZ7 1642 aa9.56□□□□□ -0.88
CD46-211ENST00000464082 SOGA1O94964 1423 aa9.56□□□□□ -0.88
CD46-211ENST00000464082 SHISA8B8ZZ34 492 aa9.55□□□□□ -0.88
CD46-211ENST00000464082 AP1G2O75843 785 aa9.55□□□□□ -0.88
CD46-211ENST00000464082 COL8A1P27658 744 aa9.55□□□□□ -0.88
CD46-211ENST00000464082 GPC1P35052 558 aa9.55□□□□□ -0.88
CD46-211ENST00000464082 C1orf229Q6ZS94 237 aaPredicted RBP9.55□□□□□ -0.88
CD46-211ENST00000464082 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.54□□□□□ -0.88
CD46-211ENST00000464082 OXCT2Q9BYC2 517 aaPredicted RBP9.54□□□□□ -0.88
CD46-211ENST00000464082 SLC24A3Q9HC58 644 aa9.54□□□□□ -0.88
CD46-211ENST00000464082 RIMBP3CA6NJZ7 1639 aa9.53□□□□□ -0.88
CD46-211ENST00000464082 RIMBP3BA6NNM3 1639 aa9.53□□□□□ -0.88
CD46-211ENST00000464082 RIMBP3Q9UFD9 1639 aa9.53□□□□□ -0.88
CD46-211ENST00000464082 PSMG3-AS1Q96PY0 264 aa9.53□□□□□ -0.88
CD46-211ENST00000464082 KRTAP9-2Q9BYQ4 174 aa9.53□□□□□ -0.88
CD46-211ENST00000464082 TDRD9Q8NDG6 1382 aaKnown RBP9.52□□□□□ -0.88
CD46-211ENST00000464082 GIGYF1O75420 1035 aaPredicted RBP9.52□□□□□ -0.89
CD46-211ENST00000464082 THBS1P07996 1170 aa9.52□□□□□ -0.89
CD46-211ENST00000464082 SLC27A3Q5K4L6 730 aa9.52□□□□□ -0.89
CD46-211ENST00000464082 NBPF10Q6P3W6 841 aaKnown RBP9.52□□□□□ -0.89
CD46-211ENST00000464082 SEPT12Q8IYM1 358 aa9.52□□□□□ -0.89
CD46-211ENST00000464082 NBPF15Q8N660 670 aa9.52□□□□□ -0.89
CD46-211ENST00000464082 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.52□□□□□ -0.89
CD46-211ENST00000464082 GRIP2Q9C0E4 1043 aa9.52□□□□□ -0.89
CD46-211ENST00000464082 NSFL1CQ9UNZ2 370 aaKnown RBP9.52□□□□□ -0.89
CD46-211ENST00000464082 ABCA10Q8WWZ4 1543 aa9.51□□□□□ -0.89
CD46-211ENST00000464082 SKIV2LQ15477 1246 aaKnown RBP9.51□□□□□ -0.89
CD46-211ENST00000464082 NUCKS1Q9H1E3 243 aaKnown RBP9.51□□□□□ -0.89
CD46-211ENST00000464082 SNAPC4Q5SXM2 1469 aa9.51□□□□□ -0.89
CD46-211ENST00000464082 MKL2Q9ULH7 1088 aa9.5□□□□□ -0.89
CD46-211ENST00000464082 KLRG1Q96E93 195 aa9.49□□□□□ -0.89
CD46-211ENST00000464082 NLRP3Q96P20 1036 aa9.49□□□□□ -0.89
CD46-211ENST00000464082 TIMMDC1Q9NPL8 285 aa9.49□□□□□ -0.89
CD46-211ENST00000464082 WRNQ14191 1432 aaPredicted RBP eCLIP9.48□□□□□ -0.89
CD46-211ENST00000464082 GRIN2BQ13224 1484 aa9.48□□□□□ -0.89
CD46-211ENST00000464082 MAGI1Q96QZ7 1491 aaPredicted RBP9.48□□□□□ -0.89
CD46-211ENST00000464082 ARHGEF11O15085 1522 aa9.48□□□□□ -0.89
CD46-211ENST00000464082 CLASP1Q7Z460 1538 aa9.48□□□□□ -0.89
CD46-211ENST00000464082 KRTAP9-6A0A140TA67 174 aa9.48□□□□□ -0.89
CD46-211ENST00000464082 F11P03951 625 aa9.48□□□□□ -0.89
CD46-211ENST00000464082 MAP2K3P46734 347 aa9.48□□□□□ -0.89
CD46-211ENST00000464082 SUV39H2Q9H5I1 410 aa9.48□□□□□ -0.89
CD46-211ENST00000464082 RRAGCQ9HB90 399 aa9.48□□□□□ -0.89
CD46-211ENST00000464082 GAPVD1Q14C86 1478 aa9.47□□□□□ -0.89
CD46-211ENST00000464082 SPATA31C2B4DYI2 1134 aa9.47□□□□□ -0.89
CD46-211ENST00000464082 USP17L8P0C7I0 530 aa9.47□□□□□ -0.89
CD46-211ENST00000464082 ERVK-9P63128 1117 aa9.47□□□□□ -0.89
CD46-211ENST00000464082 PNMA1Q8ND90 353 aa9.47□□□□□ -0.89
CD46-211ENST00000464082 ATP1B4Q9UN42 357 aaPredicted RBP9.47□□□□□ -0.89
CD46-211ENST00000464082 HOXB4P17483 251 aaPredicted RBP9.46□□□□□ -0.9
CD46-211ENST00000464082 CLN3Q13286 438 aa9.46□□□□□ -0.9
CD46-211ENST00000464082 SH3D19Q5HYK7 790 aa9.46□□□□□ -0.9
CD46-211ENST00000464082 CFHR5Q9BXR6 569 aa9.46□□□□□ -0.9
CD46-211ENST00000464082 ADAMTS12P58397 1594 aa9.46□□□□□ -0.9
CD46-211ENST00000464082 ITGB7P26010 798 aa9.45□□□□□ -0.9
CD46-211ENST00000464082 SCTRP47872 440 aa9.45□□□□□ -0.9
CD46-211ENST00000464082 GRIN2CQ14957 1233 aa9.45□□□□□ -0.9
CD46-211ENST00000464082 CC2D2BQ6DHV5 1058 aa9.45□□□□□ -0.9
CD46-211ENST00000464082 LINC00114Q6XXX2 140 aa9.45□□□□□ -0.9
CD46-211ENST00000464082 TAS1R3Q7RTX0 852 aa9.45□□□□□ -0.9
CD46-211ENST00000464082 EDARADDQ8WWZ3 215 aa9.45□□□□□ -0.9
CD46-211ENST00000464082 GPAMQ9HCL2 828 aa9.45□□□□□ -0.9
CD46-211ENST00000464082 PCDHB9Q9Y5E1 797 aa9.45□□□□□ -0.9
CD46-211ENST00000464082 WASLO00401 505 aaPredicted RBP9.44□□□□□ -0.9
CD46-211ENST00000464082 WDR44Q5JSH3 913 aa9.44□□□□□ -0.9
CD46-211ENST00000464082 ALYREFQ86V81 257 aaKnown RBP9.44□□□□□ -0.9
CD46-211ENST00000464082 SYNJ2O15056 1496 aa9.44□□□□□ -0.9
CD46-211ENST00000464082 C1QTNF9BB2RNN3 333 aa9.43□□□□□ -0.9
CD46-211ENST00000464082 TRIM34Q9BYJ4 488 aa9.43□□□□□ -0.9
CD46-211ENST00000464082 ARHGEF10LQ9HCE6 1279 aa9.43□□□□□ -0.9
CD46-211ENST00000464082 UBAP2LQ14157 1087 aaKnown RBP9.42□□□□□ -0.9
CD46-211ENST00000464082 TRIM52Q96A61 297 aa9.42□□□□□ -0.9
CD46-211ENST00000464082 C2CD2LO14523 706 aa9.41□□□□□ -0.9
CD46-211ENST00000464082 PHKA2P46019 1235 aa9.41□□□□□ -0.9
CD46-211ENST00000464082 CD163Q86VB7 1156 aa9.41□□□□□ -0.9
CD46-211ENST00000464082 RAB6BQ9NRW1 208 aa9.41□□□□□ -0.9
CD46-211ENST00000464082 ERICH3Q5RHP9 1530 aa9.41□□□□□ -0.9
CD46-211ENST00000464082 ARAP1Q96P48 1450 aa9.4□□□□□ -0.9
CD46-211ENST00000464082 FBXO45P0C2W1 286 aa9.4□□□□□ -0.9
CD46-211ENST00000464082 CYP2U1Q7Z449 544 aa9.4□□□□□ -0.9
CD46-211ENST00000464082 OSBPL3Q9H4L5 887 aa9.4□□□□□ -0.9
CD46-211ENST00000464082 GDF2Q9UK05 429 aaPredicted RBP9.4□□□□□ -0.9
CD46-211ENST00000464082 CEP170Q5SW79 1584 aa9.4□□□□□ -0.9
CD46-211ENST00000464082 ZBBXA8MT70 800 aa9.39□□□□□ -0.91
CD46-211ENST00000464082 AMPD1P23109 780 aa9.39□□□□□ -0.91
CD46-211ENST00000464082 FAM117AQ9C073 453 aa9.39□□□□□ -0.91
CD46-211ENST00000464082 GRIN2AQ12879 1464 aa9.39□□□□□ -0.91
CD46-211ENST00000464082 TRAK2O60296 914 aa9.38□□□□□ -0.91
CD46-211ENST00000464082 CHRNA4P43681 627 aa9.38□□□□□ -0.91
CD46-211ENST00000464082 GOLGA6L1Q8N7Z2 621 aa9.38□□□□□ -0.91
CD46-211ENST00000464082 SHROOM2Q13796 1616 aa9.38□□□□□ -0.91
CD46-211ENST00000464082 GGA1Q9UJY5 639 aa9.37□□□□□ -0.91
CD46-211ENST00000464082 PHF24Q9UPV7 400 aa9.37□□□□□ -0.91
CD46-211ENST00000464082 NUP160Q12769 1436 aa9.37□□□□□ -0.91
CD46-211ENST00000464082 IL2RAP01589 272 aa9.36□□□□□ -0.91
CD46-211ENST00000464082 RFC5P40937 340 aa9.36□□□□□ -0.91
CD46-211ENST00000464082 CENPCQ03188 943 aa9.36□□□□□ -0.91
CD46-211ENST00000464082 CNKSR1Q969H4 720 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms