RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 GphnQ8BUV3 769 aaKnown RBP19.23■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Col14a1Q80X19 1797 aa19.23■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Atp8b2P98199 1209 aa19.22■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Erc2Q6PH08 957 aa19.22■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Dnttip2Q8R2M2 758 aaKnown RBP19.22■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Rimbp3Q3V0F0 1606 aa19.22■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Zkscan2G3X952 960 aa19.22■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Plcd4Q8K3R3 807 aa19.22■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Kdm6aO70546 1401 aa19.2■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Stk11ipQ3TAA7 1072 aa19.2■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Tmem2Q5FWI3 1383 aa19.2■□□□□ 0.66
Sdc1-205ENSMUST00000171158 RestQ8VIG1 1082 aa19.2■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Cyp27a1Q9DBG1 533 aa19.2■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Mrps27Q8BK72 415 aaKnown RBP19.19■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Bloc1s4Q8VED2 215 aa19.19■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Amotl1Q9D4H4 968 aa19.19■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Nid2O88322 1403 aa19.19■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Ptpdc1Q6NZK8 747 aa19.19■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Cyp2d11P24457 504 aa19.18■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Isy1Q69ZQ2 285 aaKnown RBP19.18■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Il4rP16382 810 aa19.18■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Ncoa4Q5U4H9 625 aa19.18■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Thsd7aQ69ZU6 1645 aa19.17■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Cnksr1A2A9K7 700 aa19.17■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Tnnt1O88346 262 aa19.17■□□□□ 0.66
Sdc1-205ENSMUST00000171158 CalcaP70160 136 aa19.17■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Cwc27Q3TKY6 469 aa19.17■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Amotl2Q8K371 772 aa19.17■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Zkscan16A2ALW2 728 aa19.17■□□□□ 0.66
Sdc1-205ENSMUST00000171158 CoilQ5SU73 570 aa19.17■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Zkscan1Q8BGS3 561 aaKnown RBP19.17■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Bag4Q8CI61 457 aa19.17■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Mcmdc2E9Q956 681 aa19.16■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Hmox1P14901 289 aa19.16■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Prune1Q8BIW1 454 aa19.16■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Tns3Q5SSZ5 1440 aa19.16■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Topaz1E5FYH1 1653 aa19.16■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Abcc12Q80WJ6 1366 aa19.16■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Phf14Q9D4H9 881 aa19.16■□□□□ 0.66
Sdc1-205ENSMUST00000171158 BcorQ8CGN4 1759 aa19.15■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Nol8Q3UHX0 1147 aaKnown RBP19.15■□□□□ 0.66
Sdc1-205ENSMUST00000171158 TatQ8QZR1 454 aa19.15■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Eif4a1P60843 406 aaKnown RBP19.14■□□□□ 0.66
Sdc1-205ENSMUST00000171158 DekQ7TNV0 380 aaKnown RBP19.14■□□□□ 0.66
Sdc1-205ENSMUST00000171158 Siglec1Q62230 1695 aa19.13■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Gimap6Q8K349 305 aa19.13■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Unc13bQ9Z1N9 1602 aa19.13■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Gli3Q61602 1583 aa19.12■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Rasa1E9PYG6 1038 aa19.12■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Fyb1O35601 819 aa19.12■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Hoxa7P02830 229 aa19.12■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Noc3lQ8VI84 807 aaKnown RBP19.12■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Kif20aP97329 887 aa19.11■□□□□ 0.65
Sdc1-205ENSMUST00000171158 TimelessQ9R1X4 1197 aa19.11■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Ier5O89113 308 aa19.11■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Arhgef1Q61210 920 aaKnown RBP19.11■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Kcnh5Q920E3 988 aa19.11■□□□□ 0.65
Sdc1-205ENSMUST00000171158 AU015836B2RUM3 263 aa19.1■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Ipo4Q8VI75 1082 aa19.1■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Tpx2A2APB8 745 aaKnown RBP19.09■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Atg3Q9CPX6 314 aa19.09■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Col1a2Q01149 1372 aa19.09■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Dnajc10Q9DC23 793 aa19.09■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Irx6Q9ER75 438 aa19.09■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Wdr17E9Q271 1322 aa19.09■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Aox2Q5SGK3 1345 aa19.09■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Vwa3bJ9JI28 736 aa19.08■□□□□ 0.65
Sdc1-205ENSMUST00000171158 LlphQ9D945 130 aaKnown RBP19.08■□□□□ 0.65
Sdc1-205ENSMUST00000171158 Hsp90b1P08113 802 aaKnown RBP19.08■□□□□ 0.64
Sdc1-205ENSMUST00000171158 MyclP10166 368 aa19.08■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Zdhhc9P59268 364 aa19.08■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Bend3Q6PAL0 825 aa19.08■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Tmx3Q8BXZ1 456 aa19.08■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Echdc1Q9D9V3 322 aa19.08■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Nkx2-3P97334 362 aa19.07■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Ppp1r37Q8BKR5 712 aa19.07■□□□□ 0.64
Sdc1-205ENSMUST00000171158 MccE9PWI3 1003 aa19.07■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Adcy9P51830 1353 aa19.06■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Fmnl2A2APV2 1086 aa19.06■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Zap70P43404 618 aa19.06■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Tlr7P58681 1050 aa19.06■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Anapc15P60007 132 aa19.06■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Btbd11Q6GQW0 1109 aa19.06■□□□□ 0.64
Sdc1-205ENSMUST00000171158 NexnQ7TPW1 607 aa19.06■□□□□ 0.64
Sdc1-205ENSMUST00000171158 AnlnQ8K298 1121 aaKnown RBP19.06■□□□□ 0.64
Sdc1-205ENSMUST00000171158 PtmsQ9D0J8 101 aaKnown RBP19.06■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Gdpd2Q9ESM6 539 aa19.06■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Unc5clQ6R653 518 aa19.05■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Atp10bB1AWN4 1474 aa19.04■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Exoc6bA6H5Z3 810 aa19.04■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Fkbp4P30416 458 aa19.04■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Cct4P80315 539 aaKnown RBP19.03■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Amer1Q7TS75 1132 aa19.03■□□□□ 0.64
Sdc1-205ENSMUST00000171158 TnrQ8BYI9 1358 aa19.03■□□□□ 0.64
Sdc1-205ENSMUST00000171158 ImpactO55091 318 aa19.02■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Tshz3Q8CGV9 1081 aa19.02■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Pmfbp1Q9WVQ0 1022 aa19.02■□□□□ 0.64
Sdc1-205ENSMUST00000171158 SlkO54988 1233 aa19.02■□□□□ 0.64
Sdc1-205ENSMUST00000171158 Flt4P35917 1363 aa19.01■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Slc4a10Q5DTL9 1118 aa19.01■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms