RNA–Protein interactions for RNA: ENSMUST00000111198.8

Cd44-208, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 1,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-208ENSMUST00000111198 Gm10220K7N660 267 aa9.99□□□□□ -0.81
Cd44-208ENSMUST00000111198 Fam198bQ3UPI1 517 aa9.99□□□□□ -0.81
Cd44-208ENSMUST00000111198 Prkrip1Q9CWV6 186 aaKnown RBP9.99□□□□□ -0.81
Cd44-208ENSMUST00000111198 Slc5a1Q8C3K6 665 aa9.99□□□□□ -0.81
Cd44-208ENSMUST00000111198 BccipQ9CWI3 316 aa9.99□□□□□ -0.81
Cd44-208ENSMUST00000111198 Trpc5Q9QX29 975 aa9.99□□□□□ -0.81
Cd44-208ENSMUST00000111198 Tjp1P39447 1745 aaKnown RBP9.98□□□□□ -0.81
Cd44-208ENSMUST00000111198 Crb1Q8VHS2 1405 aa9.98□□□□□ -0.81
Cd44-208ENSMUST00000111198 AtrnQ9WU60 1428 aa9.98□□□□□ -0.81
Cd44-208ENSMUST00000111198 Phkg2Q9DB30 406 aa9.98□□□□□ -0.81
Cd44-208ENSMUST00000111198 Irx3P81067 507 aa9.97□□□□□ -0.81
Cd44-208ENSMUST00000111198 Asic4Q7TNS7 539 aa9.97□□□□□ -0.81
Cd44-208ENSMUST00000111198 HypkQ9CR41 129 aa9.97□□□□□ -0.81
Cd44-208ENSMUST00000111198 Igsf1Q7TQA1 1317 aa9.97□□□□□ -0.81
Cd44-208ENSMUST00000111198 Spef2Q8C9J3 1734 aa9.97□□□□□ -0.81
Cd44-208ENSMUST00000111198 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.97□□□□□ -0.81
Cd44-208ENSMUST00000111198 VaspP70460 375 aaKnown RBP9.97□□□□□ -0.81
Cd44-208ENSMUST00000111198 Plin1Q8CGN5 517 aa9.97□□□□□ -0.81
Cd44-208ENSMUST00000111198 Ssfa2Q922B9 1252 aa9.97□□□□□ -0.81
Cd44-208ENSMUST00000111198 Mbd3Q9Z2D8 285 aaKnown RBP9.97□□□□□ -0.81
Cd44-208ENSMUST00000111198 Zscan21Q07231 555 aa9.96□□□□□ -0.81
Cd44-208ENSMUST00000111198 C1qtnf12Q8R2Z0 308 aa9.96□□□□□ -0.81
Cd44-208ENSMUST00000111198 Amotl1Q9D4H4 968 aa9.96□□□□□ -0.81
Cd44-208ENSMUST00000111198 P2rx7Q9Z1M0 595 aa9.96□□□□□ -0.81
Cd44-208ENSMUST00000111198 Hdac6Q9Z2V5 1149 aa9.96□□□□□ -0.81
Cd44-208ENSMUST00000111198 Kcnq2Q9Z351 759 aa9.96□□□□□ -0.81
Cd44-208ENSMUST00000111198 TnikP83510 1323 aa9.96□□□□□ -0.82
Cd44-208ENSMUST00000111198 Mak16Q8BGS0 296 aaKnown RBP9.95□□□□□ -0.82
Cd44-208ENSMUST00000111198 Chmp7Q8R1T1 451 aa9.95□□□□□ -0.82
Cd44-208ENSMUST00000111198 Iqcf3Q9D498 203 aa9.95□□□□□ -0.82
Cd44-208ENSMUST00000111198 Pdzd9Q9D9M4 266 aa9.95□□□□□ -0.82
Cd44-208ENSMUST00000111198 Kcnh8P59111 1102 aa9.95□□□□□ -0.82
Cd44-208ENSMUST00000111198 IncenpQ9WU62 880 aa9.95□□□□□ -0.82
Cd44-208ENSMUST00000111198 MeiocA2AG06 965 aa9.94□□□□□ -0.82
Cd44-208ENSMUST00000111198 Ppp2r1aQ76MZ3 589 aa9.94□□□□□ -0.82
Cd44-208ENSMUST00000111198 Rab11fip3Q8CHD8 1047 aa9.94□□□□□ -0.82
Cd44-208ENSMUST00000111198 PalmQ9Z0P4 383 aa9.94□□□□□ -0.82
Cd44-208ENSMUST00000111198 Bicdl1A0JNT9 577 aa9.94□□□□□ -0.82
Cd44-208ENSMUST00000111198 TprnA2AI08 749 aaKnown RBP9.94□□□□□ -0.82
Cd44-208ENSMUST00000111198 Mcm10Q0VBD2 885 aa9.94□□□□□ -0.82
Cd44-208ENSMUST00000111198 Ints5Q8CHT3 1018 aa9.94□□□□□ -0.82
Cd44-208ENSMUST00000111198 CoblQ5NBX1 1337 aaKnown RBP9.93□□□□□ -0.82
Cd44-208ENSMUST00000111198 Aox2Q5SGK3 1345 aa9.93□□□□□ -0.82
Cd44-208ENSMUST00000111198 Kcna3P16390 528 aa9.93□□□□□ -0.82
Cd44-208ENSMUST00000111198 Ubxn2bQ0KL01 331 aa9.93□□□□□ -0.82
Cd44-208ENSMUST00000111198 Fchsd2Q3USJ8 740 aa9.93□□□□□ -0.82
Cd44-208ENSMUST00000111198 NppbP40753 121 aa9.92□□□□□ -0.82
Cd44-208ENSMUST00000111198 Jdp2P97875 163 aa9.92□□□□□ -0.82
Cd44-208ENSMUST00000111198 ErfeQ6PGN1 340 aa9.92□□□□□ -0.82
Cd44-208ENSMUST00000111198 Jmjd4Q8BFT6 427 aa9.92□□□□□ -0.82
Cd44-208ENSMUST00000111198 Gtf3c6Q9D8P7 227 aa9.92□□□□□ -0.82
Cd44-208ENSMUST00000111198 Ubr2Q6WKZ8 1755 aa9.92□□□□□ -0.82
Cd44-208ENSMUST00000111198 Zc3h15Q3TIV5 426 aaKnown RBP9.92□□□□□ -0.82
Cd44-208ENSMUST00000111198 Ube2q2Q8K2Z8 378 aa9.92□□□□□ -0.82
Cd44-208ENSMUST00000111198 Emilin1Q99K41 1017 aa9.92□□□□□ -0.82
Cd44-208ENSMUST00000111198 Atg3Q9CPX6 314 aa9.92□□□□□ -0.82
Cd44-208ENSMUST00000111198 Zfp444Q3TDV8 331 aaKnown RBP9.91□□□□□ -0.82
Cd44-208ENSMUST00000111198 Tsen2Q6P7W5 460 aa9.91□□□□□ -0.82
Cd44-208ENSMUST00000111198 Rpgrip1lQ8CG73 1264 aa9.91□□□□□ -0.82
Cd44-208ENSMUST00000111198 Stk31Q99MW1 1018 aa9.91□□□□□ -0.82
Cd44-208ENSMUST00000111198 Trpm3Q5F4S9 1721 aa9.91□□□□□ -0.82
Cd44-208ENSMUST00000111198 DaxxO35613 739 aa9.9□□□□□ -0.82
Cd44-208ENSMUST00000111198 Ccdc96Q9CR92 584 aa9.9□□□□□ -0.82
Cd44-208ENSMUST00000111198 Noa1Q9JJG9 693 aaKnown RBP9.9□□□□□ -0.82
Cd44-208ENSMUST00000111198 Dcaf5Q80T85 946 aa9.9□□□□□ -0.83
Cd44-208ENSMUST00000111198 Smarcc1P97496 1104 aa9.89□□□□□ -0.83
Cd44-208ENSMUST00000111198 Mtfr1lQ9CWE0 289 aa9.89□□□□□ -0.83
Cd44-208ENSMUST00000111198 GsdmaQ9EST1 446 aa9.89□□□□□ -0.83
Cd44-208ENSMUST00000111198 Spata31d1bE9QA57 1361 aa9.89□□□□□ -0.83
Cd44-208ENSMUST00000111198 Msh6P54276 1358 aaKnown RBP9.89□□□□□ -0.83
Cd44-208ENSMUST00000111198 Ric1Q69ZJ7 1422 aa9.89□□□□□ -0.83
Cd44-208ENSMUST00000111198 Zswim8Q3UHH1 1832 aaKnown RBP9.89□□□□□ -0.83
Cd44-208ENSMUST00000111198 Ubr3Q5U430 1889 aa9.89□□□□□ -0.83
Cd44-208ENSMUST00000111198 Gm13023A2A8N2 498 aa9.88□□□□□ -0.83
Cd44-208ENSMUST00000111198 Chrna2Q91X60 512 aa9.88□□□□□ -0.83
Cd44-208ENSMUST00000111198 Cap2Q9CYT6 476 aa9.88□□□□□ -0.83
Cd44-208ENSMUST00000111198 U2af1Q9D883 239 aaKnown RBP9.88□□□□□ -0.83
Cd44-208ENSMUST00000111198 C4bP01029 1738 aa9.88□□□□□ -0.83
Cd44-208ENSMUST00000111198 TmpoQ61033 693 aaKnown RBP9.88□□□□□ -0.83
Cd44-208ENSMUST00000111198 Kndc1Q0KK55 1742 aa9.87□□□□□ -0.83
Cd44-208ENSMUST00000111198 Sos1Q62245 1319 aa9.87□□□□□ -0.83
Cd44-208ENSMUST00000111198 ChgaP26339 463 aaKnown RBP9.87□□□□□ -0.83
Cd44-208ENSMUST00000111198 CanxP35564 591 aaKnown RBP9.87□□□□□ -0.83
Cd44-208ENSMUST00000111198 Smg7Q5RJH6 1138 aaKnown RBP9.87□□□□□ -0.83
Cd44-208ENSMUST00000111198 Msl1Q6PDM1 616 aa9.87□□□□□ -0.83
Cd44-208ENSMUST00000111198 Ccdc155Q80VJ8 648 aa9.87□□□□□ -0.83
Cd44-208ENSMUST00000111198 Hirip3Q8BLH7 601 aa9.87□□□□□ -0.83
Cd44-208ENSMUST00000111198 Dhx30Q99PU8 1217 aaKnown RBP9.87□□□□□ -0.83
Cd44-208ENSMUST00000111198 Tiam2Q6ZPF3 1715 aa9.87□□□□□ -0.83
Cd44-208ENSMUST00000111198 Sned1Q70E20 1403 aa9.87□□□□□ -0.83
Cd44-208ENSMUST00000111198 Nkx2-3P97334 362 aa9.86□□□□□ -0.83
Cd44-208ENSMUST00000111198 Col23a1Q8K4G2 532 aa9.86□□□□□ -0.83
Cd44-208ENSMUST00000111198 Sumf1Q8R0F3 372 aa9.86□□□□□ -0.83
Cd44-208ENSMUST00000111198 Ttc41Q692V3 1318 aa9.86□□□□□ -0.83
Cd44-208ENSMUST00000111198 Ppm1gQ61074 542 aa9.86□□□□□ -0.83
Cd44-208ENSMUST00000111198 Miga2Q8BK03 593 aa9.86□□□□□ -0.83
Cd44-208ENSMUST00000111198 EspnQ9ET47 871 aa9.86□□□□□ -0.83
Cd44-208ENSMUST00000111198 Col11a2Q64739 1736 aa9.85□□□□□ -0.83
Cd44-208ENSMUST00000111198 Abcc12Q80WJ6 1366 aa9.85□□□□□ -0.83
Cd44-208ENSMUST00000111198 Plch1Q4KWH5 1682 aa9.85□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms