RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 Msh6P54276 1358 aaKnown RBP32.04■■■□□ 2.72
Cpsf4-201ENSMUST00000070487 Ccdc85cE9Q6B2 420 aa32.04■■■□□ 2.72
Cpsf4-201ENSMUST00000070487 Ralbp1Q62172 648 aa32.04■■■□□ 2.72
Cpsf4-201ENSMUST00000070487 Gnai1B2RSH2 354 aa32.03■■■□□ 2.72
Cpsf4-201ENSMUST00000070487 Gnai3Q9DC51 354 aa32.03■■■□□ 2.72
Cpsf4-201ENSMUST00000070487 Gm13023A2A8N2 498 aa32.02■■■□□ 2.72
Cpsf4-201ENSMUST00000070487 MeiocA2AG06 965 aa32.02■■■□□ 2.72
Cpsf4-201ENSMUST00000070487 DiexfQ8BTT6 772 aaKnown RBP32.02■■■□□ 2.72
Cpsf4-201ENSMUST00000070487 PigbQ9JJQ0 542 aa32.02■■■□□ 2.72
Cpsf4-201ENSMUST00000070487 Mylk2Q8VCR8 613 aa32.01■■■□□ 2.72
Cpsf4-201ENSMUST00000070487 Eif4a1P60843 406 aaKnown RBP32■■■□□ 2.71
Cpsf4-201ENSMUST00000070487 Neurod2Q62414 383 aa32■■■□□ 2.71
Cpsf4-201ENSMUST00000070487 TefQ9JLC6 301 aa32■■■□□ 2.71
Cpsf4-201ENSMUST00000070487 NppbP40753 121 aa32■■■□□ 2.71
Cpsf4-201ENSMUST00000070487 Iqsec3Q3TES0 1195 aa32■■■□□ 2.71
Cpsf4-201ENSMUST00000070487 Atxn3Q9CVD2 355 aa32■■■□□ 2.71
Cpsf4-201ENSMUST00000070487 Irx6Q9ER75 438 aa32■■■□□ 2.71
Cpsf4-201ENSMUST00000070487 Klhdc4Q921I2 584 aa31.99■■■□□ 2.71
Cpsf4-201ENSMUST00000070487 Cers3Q1A3B0 383 aa31.98■■■□□ 2.71
Cpsf4-201ENSMUST00000070487 Col1a2Q01149 1372 aa31.98■■■□□ 2.71
Cpsf4-201ENSMUST00000070487 Flad1Q8R123 492 aa31.97■■■□□ 2.71
Cpsf4-201ENSMUST00000070487 Kndc1Q0KK55 1742 aa31.97■■■□□ 2.71
Cpsf4-201ENSMUST00000070487 U2surpQ6NV83 1029 aaKnown RBP31.97■■■□□ 2.71
Cpsf4-201ENSMUST00000070487 Cnnm1Q0GA42 951 aa31.95■■■□□ 2.71
Cpsf4-201ENSMUST00000070487 Rad21Q61550 635 aaKnown RBP31.94■■■□□ 2.7
Cpsf4-201ENSMUST00000070487 Senp3Q9EP97 568 aaKnown RBP31.94■■■□□ 2.7
Cpsf4-201ENSMUST00000070487 Pibf1E9Q6K3 756 aa31.93■■■□□ 2.7
Cpsf4-201ENSMUST00000070487 Jdp2P97875 163 aa31.93■■■□□ 2.7
Cpsf4-201ENSMUST00000070487 Cdc37l1Q9CZP7 335 aa31.93■■■□□ 2.7
Cpsf4-201ENSMUST00000070487 Anks4bQ8K3X6 423 aa31.93■■■□□ 2.7
Cpsf4-201ENSMUST00000070487 Taf7Q9R1C0 341 aa31.93■■■□□ 2.7
Cpsf4-201ENSMUST00000070487 Usp16Q99LG0 825 aa31.92■■■□□ 2.7
Cpsf4-201ENSMUST00000070487 Syde2E9PUP1 1314 aa31.91■■■□□ 2.7
Cpsf4-201ENSMUST00000070487 Lrrc43Q3V0L5 667 aa31.91■■■□□ 2.7
Cpsf4-201ENSMUST00000070487 Nav1Q8CH77 1875 aa31.91■■■□□ 2.7
Cpsf4-201ENSMUST00000070487 Cyp2d12Q8BVD2 504 aa31.9■■■□□ 2.7
Cpsf4-201ENSMUST00000070487 GckrQ91X44 587 aa31.9■■■□□ 2.7
Cpsf4-201ENSMUST00000070487 Gm12185Q5NCB2 835 aa31.89■■■□□ 2.7
Cpsf4-201ENSMUST00000070487 1700019A02RikA0A087WPV9 146 aa31.89■■■□□ 2.7
Cpsf4-201ENSMUST00000070487 Q3TQI7 289 aaKnown RBP31.88■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 Gpr150Q8BL07 427 aa31.88■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 Clcn1Q64347 994 aa31.87■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 RtcbQ99LF4 505 aaKnown RBP31.87■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 Trpc5Q9QX29 975 aa31.87■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 Ttc21aQ8C0S4 1314 aa31.87■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 Spata31d1bE9QA57 1361 aa31.87■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 Tnnt1O88346 262 aa31.86■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 Chpf2Q3UU43 768 aa31.86■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 Pdia6Q922R8 440 aaKnown RBP31.86■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 Prkab2Q6PAM0 271 aa31.86■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 Ankrd50F7BE84 1390 aa31.85■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 Rbm25B2RY56 838 aaKnown RBP31.85■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 MetP16056 1379 aa31.85■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 NudcO35685 332 aaKnown RBP31.84■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 Atf5O70191 283 aa31.84■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 Fkbp4P30416 458 aa31.84■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 Nip7Q9CXK8 180 aaKnown RBP31.84■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 Ccdc30Q8BVF4 654 aa31.83■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 IncenpQ9WU62 880 aa31.83■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 Zfyve9A2A8R0 1397 aa31.83■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 PsapQ61207 557 aaKnown RBP31.82■■■□□ 2.69
Cpsf4-201ENSMUST00000070487 Bcl2l13P59017 434 aa31.82■■■□□ 2.68
Cpsf4-201ENSMUST00000070487 Sumf1Q8R0F3 372 aa31.82■■■□□ 2.68
Cpsf4-201ENSMUST00000070487 Zbtb1Q91VL9 713 aa31.82■■■□□ 2.68
Cpsf4-201ENSMUST00000070487 AtrnQ9WU60 1428 aa31.81■■■□□ 2.68
Cpsf4-201ENSMUST00000070487 ErfeQ6PGN1 340 aa31.81■■■□□ 2.68
Cpsf4-201ENSMUST00000070487 Tmem119Q8R138 280 aa31.81■■■□□ 2.68
Cpsf4-201ENSMUST00000070487 C4bP01029 1738 aa31.8■■■□□ 2.68
Cpsf4-201ENSMUST00000070487 Gigyf1Q99MR1 1044 aaKnown RBP31.8■■■□□ 2.68
Cpsf4-201ENSMUST00000070487 Prr29B1ARI9 187 aa31.79■■■□□ 2.68
Cpsf4-201ENSMUST00000070487 CastP51125 788 aa31.79■■■□□ 2.68
Cpsf4-201ENSMUST00000070487 PsdQ5DTT2 1024 aa31.78■■■□□ 2.68
Cpsf4-201ENSMUST00000070487 Zfp444Q3TDV8 331 aaKnown RBP31.78■■■□□ 2.68
Cpsf4-201ENSMUST00000070487 Ksr2Q3UVC0 959 aa31.77■■■□□ 2.68
Cpsf4-201ENSMUST00000070487 SympkQ80X82 1284 aa31.76■■■□□ 2.67
Cpsf4-201ENSMUST00000070487 HmcesQ8R1M0 353 aaKnown RBP31.76■■■□□ 2.67
Cpsf4-201ENSMUST00000070487 Morc2aQ69ZX6 1030 aa31.75■■■□□ 2.67
Cpsf4-201ENSMUST00000070487 Dlg5E9Q9R9 1921 aa31.75■■■□□ 2.67
Cpsf4-201ENSMUST00000070487 Erbb4Q61527 1308 aa31.75■■■□□ 2.67
Cpsf4-201ENSMUST00000070487 Msl1Q6PDM1 616 aa31.75■■■□□ 2.67
Cpsf4-201ENSMUST00000070487 Slc39a6Q8C145 765 aa31.74■■■□□ 2.67
Cpsf4-201ENSMUST00000070487 Chrna2Q91X60 512 aa31.74■■■□□ 2.67
Cpsf4-201ENSMUST00000070487 Rapgef4Q9EQZ6 1011 aa31.74■■■□□ 2.67
Cpsf4-201ENSMUST00000070487 Ubr3Q5U430 1889 aa31.73■■■□□ 2.67
Cpsf4-201ENSMUST00000070487 En2P09066 324 aa31.73■■■□□ 2.67
Cpsf4-201ENSMUST00000070487 Amhr2Q8K592 568 aa31.73■■■□□ 2.67
Cpsf4-201ENSMUST00000070487 Slfnl1Q8BHW9 410 aa31.72■■■□□ 2.67
Cpsf4-201ENSMUST00000070487 Col23a1Q8K4G2 532 aa31.72■■■□□ 2.67
Cpsf4-201ENSMUST00000070487 Emilin1Q99K41 1017 aa31.72■■■□□ 2.67
Cpsf4-201ENSMUST00000070487 Ofd1Q80Z25 1017 aa31.71■■■□□ 2.67
Cpsf4-201ENSMUST00000070487 Prr5lA2AVJ5 370 aa31.68■■■□□ 2.66
Cpsf4-201ENSMUST00000070487 Atp1b3P97370 278 aa31.68■■■□□ 2.66
Cpsf4-201ENSMUST00000070487 Nsfl1cQ9CZ44 370 aaKnown RBP31.68■■■□□ 2.66
Cpsf4-201ENSMUST00000070487 Dpf1Q9QX66 387 aa31.68■■■□□ 2.66
Cpsf4-201ENSMUST00000070487 Sned1Q70E20 1403 aa31.68■■■□□ 2.66
Cpsf4-201ENSMUST00000070487 Gas2l2Q5SSG4 860 aa31.67■■■□□ 2.66
Cpsf4-201ENSMUST00000070487 Trim52Q8CDV4 233 aa31.67■■■□□ 2.66
Cpsf4-201ENSMUST00000070487 Plekhh1Q80TI1 1356 aa31.67■■■□□ 2.66
Cpsf4-201ENSMUST00000070487 Cnksr1A2A9K7 700 aa31.66■■■□□ 2.66
Cpsf4-201ENSMUST00000070487 Vamp4O70480 141 aa31.66■■■□□ 2.66
Retrieved 100 of 22,080 RNA–protein pairs in 59.6 ms