RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Gnai3Q9DC51 354 aa24.04■■□□□ 1.44
Vti1b-201ENSMUST00000055262 Btbd11Q6GQW0 1109 aa24.03■■□□□ 1.44
Vti1b-201ENSMUST00000055262 Prim1P20664 417 aa24.01■■□□□ 1.43
Vti1b-201ENSMUST00000055262 Ggnbp2Q5SV77 696 aa24.01■■□□□ 1.43
Vti1b-201ENSMUST00000055262 CoblQ5NBX1 1337 aaKnown RBP24.01■■□□□ 1.43
Vti1b-201ENSMUST00000055262 Smarcc1P97496 1104 aa24■■□□□ 1.43
Vti1b-201ENSMUST00000055262 Irx6Q9ER75 438 aa24■■□□□ 1.43
Vti1b-201ENSMUST00000055262 Tiam2Q6ZPF3 1715 aa24■■□□□ 1.43
Vti1b-201ENSMUST00000055262 Ttc21aQ8C0S4 1314 aa24■■□□□ 1.43
Vti1b-201ENSMUST00000055262 Ankrd50F7BE84 1390 aa23.99■■□□□ 1.43
Vti1b-201ENSMUST00000055262 Miga2Q8BK03 593 aa23.97■■□□□ 1.43
Vti1b-201ENSMUST00000055262 Cdc37l1Q9CZP7 335 aa23.97■■□□□ 1.43
Vti1b-201ENSMUST00000055262 Akt1s1Q9D1F4 257 aa23.97■■□□□ 1.43
Vti1b-201ENSMUST00000055262 Ric1Q69ZJ7 1422 aa23.97■■□□□ 1.43
Vti1b-201ENSMUST00000055262 Gm13023A2A8N2 498 aa23.96■■□□□ 1.43
Vti1b-201ENSMUST00000055262 MeiocA2AG06 965 aa23.96■■□□□ 1.43
Vti1b-201ENSMUST00000055262 PsdQ5DTT2 1024 aa23.96■■□□□ 1.43
Vti1b-201ENSMUST00000055262 NudcO35685 332 aaKnown RBP23.95■■□□□ 1.42
Vti1b-201ENSMUST00000055262 Foxp4Q9DBY0 795 aaKnown RBP23.95■■□□□ 1.42
Vti1b-201ENSMUST00000055262 Msh6P54276 1358 aaKnown RBP23.95■■□□□ 1.42
Vti1b-201ENSMUST00000055262 Senp3Q9EP97 568 aaKnown RBP23.94■■□□□ 1.42
Vti1b-201ENSMUST00000055262 PigbQ9JJQ0 542 aa23.94■■□□□ 1.42
Vti1b-201ENSMUST00000055262 Rbm25B2RY56 838 aaKnown RBP23.94■■□□□ 1.42
Vti1b-201ENSMUST00000055262 Nav1Q8CH77 1875 aa23.94■■□□□ 1.42
Vti1b-201ENSMUST00000055262 Adcy9P51830 1353 aa23.93■■□□□ 1.42
Vti1b-201ENSMUST00000055262 Pde4dQ01063 747 aa23.93■■□□□ 1.42
Vti1b-201ENSMUST00000055262 Jdp2P97875 163 aa23.92■■□□□ 1.42
Vti1b-201ENSMUST00000055262 Ksr2Q3UVC0 959 aa23.92■■□□□ 1.42
Vti1b-201ENSMUST00000055262 U2surpQ6NV83 1029 aaKnown RBP23.92■■□□□ 1.42
Vti1b-201ENSMUST00000055262 Klhdc4Q921I2 584 aa23.92■■□□□ 1.42
Vti1b-201ENSMUST00000055262 Usp16Q99LG0 825 aa23.92■■□□□ 1.42
Vti1b-201ENSMUST00000055262 Kndc1Q0KK55 1742 aa23.91■■□□□ 1.42
Vti1b-201ENSMUST00000055262 Pibf1E9Q6K3 756 aa23.9■■□□□ 1.42
Vti1b-201ENSMUST00000055262 Syde2E9PUP1 1314 aa23.9■■□□□ 1.42
Vti1b-201ENSMUST00000055262 NppbP40753 121 aa23.89■■□□□ 1.42
Vti1b-201ENSMUST00000055262 Cnnm1Q0GA42 951 aa23.88■■□□□ 1.41
Vti1b-201ENSMUST00000055262 Msl1Q6PDM1 616 aa23.88■■□□□ 1.41
Vti1b-201ENSMUST00000055262 TefQ9JLC6 301 aa23.88■■□□□ 1.41
Vti1b-201ENSMUST00000055262 Dlg5E9Q9R9 1921 aa23.88■■□□□ 1.41
Vti1b-201ENSMUST00000055262 Col1a2Q01149 1372 aa23.88■■□□□ 1.41
Vti1b-201ENSMUST00000055262 AtrnQ9WU60 1428 aa23.88■■□□□ 1.41
Vti1b-201ENSMUST00000055262 Tnnt1O88346 262 aa23.87■■□□□ 1.41
Vti1b-201ENSMUST00000055262 Eif4a1P60843 406 aaKnown RBP23.87■■□□□ 1.41
Vti1b-201ENSMUST00000055262 Clcn1Q64347 994 aa23.87■■□□□ 1.41
Vti1b-201ENSMUST00000055262 Gpr150Q8BL07 427 aa23.87■■□□□ 1.41
Vti1b-201ENSMUST00000055262 DiexfQ8BTT6 772 aaKnown RBP23.87■■□□□ 1.41
Vti1b-201ENSMUST00000055262 Ccar1Q8CH18 1146 aaKnown RBP23.87■■□□□ 1.41
Vti1b-201ENSMUST00000055262 Trpc5Q9QX29 975 aa23.87■■□□□ 1.41
Vti1b-201ENSMUST00000055262 Gas2l2Q5SSG4 860 aa23.86■■□□□ 1.41
Vti1b-201ENSMUST00000055262 Chrna2Q91X60 512 aa23.86■■□□□ 1.41
Vti1b-201ENSMUST00000055262 CastP51125 788 aa23.85■■□□□ 1.41
Vti1b-201ENSMUST00000055262 Iqsec3Q3TES0 1195 aa23.85■■□□□ 1.41
Vti1b-201ENSMUST00000055262 Flad1Q8R123 492 aa23.85■■□□□ 1.41
Vti1b-201ENSMUST00000055262 IncenpQ9WU62 880 aa23.85■■□□□ 1.41
Vti1b-201ENSMUST00000055262 1700019A02RikA0A087WPV9 146 aa23.84■■□□□ 1.41
Vti1b-201ENSMUST00000055262 Mylk2Q8VCR8 613 aa23.84■■□□□ 1.41
Vti1b-201ENSMUST00000055262 Znf710Q3U288 666 aa23.83■■□□□ 1.41
Vti1b-201ENSMUST00000055262 Sumf1Q8R0F3 372 aa23.83■■□□□ 1.41
Vti1b-201ENSMUST00000055262 C4bP01029 1738 aa23.83■■□□□ 1.41
Vti1b-201ENSMUST00000055262 Atf5O70191 283 aa23.82■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Bcl2l13P59017 434 aa23.82■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Cyp2d12Q8BVD2 504 aa23.82■■□□□ 1.4
Vti1b-201ENSMUST00000055262 RtcbQ99LF4 505 aaKnown RBP23.82■■□□□ 1.4
Vti1b-201ENSMUST00000055262 En2P09066 324 aa23.81■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Q3TQI7 289 aaKnown RBP23.81■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Lrrc43Q3V0L5 667 aa23.81■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Zbtb1Q91VL9 713 aa23.81■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Emilin1Q99K41 1017 aa23.81■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Plekhh1Q80TI1 1356 aa23.81■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Kank1E9Q238 1360 aa23.81■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Spata31d1bE9QA57 1361 aa23.81■■□□□ 1.4
Vti1b-201ENSMUST00000055262 MetP16056 1379 aa23.81■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Prkab2Q6PAM0 271 aa23.81■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Cers3Q1A3B0 383 aa23.8■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Chpf2Q3UU43 768 aa23.8■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Gm12185Q5NCB2 835 aa23.8■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Slfnl1Q8BHW9 410 aa23.8■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Nip7Q9CXK8 180 aaKnown RBP23.8■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Taf7Q9R1C0 341 aa23.8■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Ccdc171E9Q1U1 1324 aa23.79■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Ttc41Q692V3 1318 aa23.79■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Vamp4O70480 141 aa23.79■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Magea1O89006 320 aa23.79■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Magea5O89009 320 aa23.79■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Fkbp4P30416 458 aa23.79■■□□□ 1.4
Vti1b-201ENSMUST00000055262 GckrQ91X44 587 aa23.79■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Magea2Q9R2A2 320 aa23.79■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Ubr3Q5U430 1889 aa23.78■■□□□ 1.4
Vti1b-201ENSMUST00000055262 ErfeQ6PGN1 340 aa23.77■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Pdia6Q922R8 440 aaKnown RBP23.77■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Col11a2Q64739 1736 aa23.77■■□□□ 1.4
Vti1b-201ENSMUST00000055262 Col23a1Q8K4G2 532 aa23.76■■□□□ 1.39
Vti1b-201ENSMUST00000055262 Tmem119Q8R138 280 aa23.76■■□□□ 1.39
Vti1b-201ENSMUST00000055262 PsapQ61207 557 aaKnown RBP23.75■■□□□ 1.39
Vti1b-201ENSMUST00000055262 HmcesQ8R1M0 353 aaKnown RBP23.75■■□□□ 1.39
Vti1b-201ENSMUST00000055262 Col4a1P02463 1669 aa23.75■■□□□ 1.39
Vti1b-201ENSMUST00000055262 Sned1Q70E20 1403 aa23.75■■□□□ 1.39
Vti1b-201ENSMUST00000055262 BcorQ8CGN4 1759 aa23.74■■□□□ 1.39
Vti1b-201ENSMUST00000055262 Rapgef4Q9EQZ6 1011 aa23.74■■□□□ 1.39
Vti1b-201ENSMUST00000055262 Zfyve9A2A8R0 1397 aa23.73■■□□□ 1.39
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms