Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC1Q9Y5R8 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC1Q9Y5R8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC1Q9Y5R8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC1Q9Y5R8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAPPC1Q9Y5R8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAPPC1Q9Y5R8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAPPC1Q9Y5R8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAPPC1Q9Y5R8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC1Q9Y5R8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC1Q9Y5R8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAPPC1Q9Y5R8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRAPPC1Q9Y5R8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAPPC1Q9Y5R8 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAPPC1Q9Y5R8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAPPC1Q9Y5R8 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 AC120498.10-201ENST00000621827 505 ntBASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 AC022211.2-201ENST00000585075 2527 ntBASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 PHGDH-210ENST00000641115 1638 ntBASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRAPPC1Q9Y5R8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 AC007322.3-201ENST00000426526 701 ntBASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 AC063926.3-201ENST00000624734 5658 ntBASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAPPC1Q9Y5R8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms