Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SALL4Q9UJQ4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SALL4Q9UJQ4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SALL4Q9UJQ4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SALL4Q9UJQ4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.98■□□□□ 0.79
SALL4Q9UJQ4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SALL4Q9UJQ4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SALL4Q9UJQ4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SALL4Q9UJQ4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SALL4Q9UJQ4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SALL4Q9UJQ4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.98■□□□□ 0.79
SALL4Q9UJQ4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SALL4Q9UJQ4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SALL4Q9UJQ4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
SALL4Q9UJQ4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.98■□□□□ 0.79
SALL4Q9UJQ4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.98■□□□□ 0.79
SALL4Q9UJQ4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.98■□□□□ 0.79
SALL4Q9UJQ4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 KRT8P11-201ENST00000409686 1436 ntBASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 C1QBPP2-201ENST00000528754 825 ntBASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 PRKY-204ENST00000533551 1019 ntBASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 FAM197Y4-202ENST00000622692 608 ntBASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SALL4Q9UJQ4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 AC135776.1-201ENST00000319817 2481 ntBASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 AC008764.6-201ENST00000595909 2069 ntBASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SALL4Q9UJQ4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
SALL4Q9UJQ4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.79
SALL4Q9UJQ4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.95■□□□□ 0.79
SALL4Q9UJQ4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 LTB4R2-202ENST00000528054 3092 ntBASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 MIR718-201ENST00000390190 70 ntBASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.95■□□□□ 0.78
SALL4Q9UJQ4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms