Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.42■□□□□ 0.38
HPF1Q9NWY4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.42■□□□□ 0.38
HPF1Q9NWY4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HPF1Q9NWY4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HPF1Q9NWY4 AL590326.2-201ENST00000625139 305 ntBASIC17.42■□□□□ 0.38
HPF1Q9NWY4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HPF1Q9NWY4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HPF1Q9NWY4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HPF1Q9NWY4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HPF1Q9NWY4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HPF1Q9NWY4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.42■□□□□ 0.38
HPF1Q9NWY4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.42■□□□□ 0.38
HPF1Q9NWY4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
HPF1Q9NWY4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HPF1Q9NWY4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HPF1Q9NWY4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HPF1Q9NWY4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
HPF1Q9NWY4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 AL138966.2-201ENST00000621997 464 ntBASIC17.41■□□□□ 0.38
HPF1Q9NWY4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HPF1Q9NWY4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 TEX21P-204ENST00000641479 1693 ntBASIC17.4■□□□□ 0.38
HPF1Q9NWY4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 DUX4L26-201ENST00000489078 1255 ntBASIC17.4■□□□□ 0.38
HPF1Q9NWY4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 AC141257.4-201ENST00000634557 245 ntBASIC17.4■□□□□ 0.38
HPF1Q9NWY4 AC136944.6-201ENST00000634818 245 ntBASIC17.4■□□□□ 0.38
HPF1Q9NWY4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPF1Q9NWY4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HPF1Q9NWY4 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.39■□□□□ 0.38
HPF1Q9NWY4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
HPF1Q9NWY4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
HPF1Q9NWY4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.39■□□□□ 0.38
HPF1Q9NWY4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.39■□□□□ 0.38
HPF1Q9NWY4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HPF1Q9NWY4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms