Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 AC142381.4-202ENST00000563973 229 ntBASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 AC110285.5-201ENST00000611501 352 ntBASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 AL359736.2-201ENST00000621992 437 ntBASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIN7CQ9NUP9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 GCSHP5-201ENST00000443090 522 ntBASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 BICD1-207ENST00000551848 1962 ntBASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LIN7CQ9NUP9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 AC098590.1-201ENST00000468126 897 ntBASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.61■□□□□ 0.09
LIN7CQ9NUP9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms