Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIF1Q9H611 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIF1Q9H611 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIF1Q9H611 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIF1Q9H611 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIF1Q9H611 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIF1Q9H611 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIF1Q9H611 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.95■□□□□ 0.46
PIF1Q9H611 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIF1Q9H611 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PIF1Q9H611 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
PIF1Q9H611 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PIF1Q9H611 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIF1Q9H611 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PIF1Q9H611 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.95■□□□□ 0.46
PIF1Q9H611 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.95■□□□□ 0.46
PIF1Q9H611 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.95■□□□□ 0.46
PIF1Q9H611 KRT18P16-201ENST00000510337 1294 ntBASIC17.95■□□□□ 0.46
PIF1Q9H611 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.95■□□□□ 0.46
PIF1Q9H611 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.95■□□□□ 0.46
PIF1Q9H611 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
PIF1Q9H611 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PIF1Q9H611 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIF1Q9H611 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PIF1Q9H611 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIF1Q9H611 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PIF1Q9H611 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PIF1Q9H611 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIF1Q9H611 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIF1Q9H611 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PIF1Q9H611 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PIF1Q9H611 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PIF1Q9H611 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PIF1Q9H611 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PIF1Q9H611 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
PIF1Q9H611 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PIF1Q9H611 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PIF1Q9H611 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
PIF1Q9H611 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PIF1Q9H611 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PIF1Q9H611 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PIF1Q9H611 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
PIF1Q9H611 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.94■□□□□ 0.46
PIF1Q9H611 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PIF1Q9H611 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PIF1Q9H611 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.94■□□□□ 0.46
PIF1Q9H611 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.94■□□□□ 0.46
PIF1Q9H611 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PIF1Q9H611 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.94■□□□□ 0.46
PIF1Q9H611 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.94■□□□□ 0.46
PIF1Q9H611 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PIF1Q9H611 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.94■□□□□ 0.46
PIF1Q9H611 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.94■□□□□ 0.46
PIF1Q9H611 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PIF1Q9H611 AC083906.6-201ENST00000641366 219 ntBASIC17.94■□□□□ 0.46
PIF1Q9H611 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PIF1Q9H611 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PIF1Q9H611 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PIF1Q9H611 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PIF1Q9H611 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PIF1Q9H611 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PIF1Q9H611 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PIF1Q9H611 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PIF1Q9H611 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PIF1Q9H611 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.94■□□□□ 0.46
PIF1Q9H611 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PIF1Q9H611 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PIF1Q9H611 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PIF1Q9H611 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PIF1Q9H611 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PIF1Q9H611 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PIF1Q9H611 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PIF1Q9H611 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.93■□□□□ 0.46
PIF1Q9H611 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.93■□□□□ 0.46
PIF1Q9H611 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PIF1Q9H611 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PIF1Q9H611 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.93■□□□□ 0.46
PIF1Q9H611 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
PIF1Q9H611 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PIF1Q9H611 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PIF1Q9H611 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PIF1Q9H611 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PIF1Q9H611 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.93■□□□□ 0.46
PIF1Q9H611 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PIF1Q9H611 OR6D1P-202ENST00000641007 5290 ntBASIC17.93■□□□□ 0.46
PIF1Q9H611 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PIF1Q9H611 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.93■□□□□ 0.46
PIF1Q9H611 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
PIF1Q9H611 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.92■□□□□ 0.46
PIF1Q9H611 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PIF1Q9H611 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PIF1Q9H611 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.92■□□□□ 0.46
PIF1Q9H611 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PIF1Q9H611 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.92■□□□□ 0.46
PIF1Q9H611 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PIF1Q9H611 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PIF1Q9H611 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.92■□□□□ 0.46
PIF1Q9H611 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PIF1Q9H611 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PIF1Q9H611 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms