Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX47Q9H0S4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
DDX47Q9H0S4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX47Q9H0S4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX47Q9H0S4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDX47Q9H0S4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDX47Q9H0S4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDX47Q9H0S4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDX47Q9H0S4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDX47Q9H0S4 RCC2P6-201ENST00000526625 1557 ntBASIC19.58■□□□□ 0.73
DDX47Q9H0S4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDX47Q9H0S4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDX47Q9H0S4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.58■□□□□ 0.73
DDX47Q9H0S4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.58■□□□□ 0.73
DDX47Q9H0S4 MTMR9LP-203ENST00000426597 1545 ntBASIC19.58■□□□□ 0.73
DDX47Q9H0S4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
DDX47Q9H0S4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX47Q9H0S4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX47Q9H0S4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX47Q9H0S4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DDX47Q9H0S4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
DDX47Q9H0S4 AC098934.4-201ENST00000564127 592 ntBASIC19.58■□□□□ 0.72
DDX47Q9H0S4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.58■□□□□ 0.72
DDX47Q9H0S4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX47Q9H0S4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
DDX47Q9H0S4 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.58■□□□□ 0.72
DDX47Q9H0S4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.58■□□□□ 0.72
DDX47Q9H0S4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX47Q9H0S4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.58■□□□□ 0.72
DDX47Q9H0S4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX47Q9H0S4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX47Q9H0S4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX47Q9H0S4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 AC135776.1-201ENST00000319817 2481 ntBASIC19.56■□□□□ 0.72
DDX47Q9H0S4 MIR935-201ENST00000401179 91 ntBASIC19.56■□□□□ 0.72
DDX47Q9H0S4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.56■□□□□ 0.72
DDX47Q9H0S4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX47Q9H0S4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
DDX47Q9H0S4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX47Q9H0S4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.55■□□□□ 0.72
DDX47Q9H0S4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
DDX47Q9H0S4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.55■□□□□ 0.72
DDX47Q9H0S4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms