Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 SIRPAP1-201ENST00000448467 1770 ntBASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 NT5C3AP1-201ENST00000394500 1012 ntBASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 AC099791.1-201ENST00000416440 715 ntBASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 RARRES2P1-201ENST00000474487 481 ntBASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 AC012414.1-201ENST00000556676 535 ntBASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms