Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 AC018553.1-201ENST00000616682 1458 ntBASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 AC138028.4-201ENST00000564984 1845 ntBASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RAB3IPQ96QF0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB3IPQ96QF0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RAB3IPQ96QF0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
RAB3IPQ96QF0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB3IPQ96QF0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.33■□□□□ 0.53
RAB3IPQ96QF0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB3IPQ96QF0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RAB3IPQ96QF0 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB3IPQ96QF0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RAB3IPQ96QF0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RAB3IPQ96QF0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 AC012414.1-201ENST00000556676 535 ntBASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 AC135776.1-201ENST00000319817 2481 ntBASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB3IPQ96QF0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 AC104417.2-201ENST00000562989 1793 ntBASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 YBX1P1-201ENST00000445822 960 ntBASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 AP001160.3-201ENST00000601484 763 ntBASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RAB3IPQ96QF0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.31■□□□□ 0.52
RAB3IPQ96QF0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IPQ96QF0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IPQ96QF0 AC108860.2-201ENST00000562760 2183 ntBASIC18.31■□□□□ 0.52
RAB3IPQ96QF0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IPQ96QF0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IPQ96QF0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.31■□□□□ 0.52
RAB3IPQ96QF0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IPQ96QF0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IPQ96QF0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms