Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPS1Q92902 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPS1Q92902 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.14■□□□□ 0.33
HPS1Q92902 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPS1Q92902 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
HPS1Q92902 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HPS1Q92902 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HPS1Q92902 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.14■□□□□ 0.33
HPS1Q92902 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPS1Q92902 AL158047.1-201ENST00000445918 881 ntBASIC17.14■□□□□ 0.33
HPS1Q92902 AC073648.6-201ENST00000641589 218 ntBASIC17.14■□□□□ 0.33
HPS1Q92902 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPS1Q92902 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.14■□□□□ 0.33
HPS1Q92902 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.14■□□□□ 0.33
HPS1Q92902 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HPS1Q92902 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
HPS1Q92902 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPS1Q92902 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPS1Q92902 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPS1Q92902 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPS1Q92902 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPS1Q92902 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HPS1Q92902 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPS1Q92902 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.13■□□□□ 0.33
HPS1Q92902 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HPS1Q92902 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.13■□□□□ 0.33
HPS1Q92902 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HPS1Q92902 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.13■□□□□ 0.33
HPS1Q92902 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.13■□□□□ 0.33
HPS1Q92902 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HPS1Q92902 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.13■□□□□ 0.33
HPS1Q92902 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.13■□□□□ 0.33
HPS1Q92902 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.13■□□□□ 0.33
HPS1Q92902 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HPS1Q92902 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
HPS1Q92902 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS1Q92902 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.13■□□□□ 0.33
HPS1Q92902 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS1Q92902 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS1Q92902 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS1Q92902 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS1Q92902 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS1Q92902 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPS1Q92902 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.12■□□□□ 0.33
HPS1Q92902 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS1Q92902 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.12■□□□□ 0.33
HPS1Q92902 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS1Q92902 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS1Q92902 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS1Q92902 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS1Q92902 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPS1Q92902 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
HPS1Q92902 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS1Q92902 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.12■□□□□ 0.33
HPS1Q92902 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPS1Q92902 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
HPS1Q92902 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPS1Q92902 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HPS1Q92902 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.12■□□□□ 0.33
HPS1Q92902 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.12■□□□□ 0.33
HPS1Q92902 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC17.12■□□□□ 0.33
HPS1Q92902 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS1Q92902 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.12■□□□□ 0.33
HPS1Q92902 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS1Q92902 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.12■□□□□ 0.33
HPS1Q92902 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.12■□□□□ 0.33
HPS1Q92902 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS1Q92902 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS1Q92902 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS1Q92902 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HPS1Q92902 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS1Q92902 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.11■□□□□ 0.33
HPS1Q92902 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HPS1Q92902 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS1Q92902 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS1Q92902 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
HPS1Q92902 KRT17P3-201ENST00000420566 1262 ntBASIC17.11■□□□□ 0.33
HPS1Q92902 UNC93B4-201ENST00000505679 747 ntBASIC17.11■□□□□ 0.33
HPS1Q92902 PNMA6B-201ENST00000538162 1200 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms