Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA4DQ92854 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
SEMA4DQ92854 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA4DQ92854 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA4DQ92854 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA4DQ92854 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA4DQ92854 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.19■□□□□ 0.82
SEMA4DQ92854 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA4DQ92854 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.18■□□□□ 0.82
SEMA4DQ92854 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA4DQ92854 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SEMA4DQ92854 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA4DQ92854 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
SEMA4DQ92854 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA4DQ92854 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.18■□□□□ 0.82
SEMA4DQ92854 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SEMA4DQ92854 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.18■□□□□ 0.82
SEMA4DQ92854 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA4DQ92854 AC087499.1-201ENST00000418141 1075 ntBASIC20.18■□□□□ 0.82
SEMA4DQ92854 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA4DQ92854 MCCD1P1-208ENST00000445732 328 ntBASIC20.18■□□□□ 0.82
SEMA4DQ92854 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.18■□□□□ 0.82
SEMA4DQ92854 EGLN1P1-201ENST00000531623 762 ntBASIC20.18■□□□□ 0.82
SEMA4DQ92854 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.18■□□□□ 0.82
SEMA4DQ92854 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA4DQ92854 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.18■□□□□ 0.82
SEMA4DQ92854 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA4DQ92854 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.18■□□□□ 0.82
SEMA4DQ92854 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA4DQ92854 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SEMA4DQ92854 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA4DQ92854 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA4DQ92854 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA4DQ92854 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.18■□□□□ 0.82
SEMA4DQ92854 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA4DQ92854 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.17■□□□□ 0.82
SEMA4DQ92854 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA4DQ92854 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA4DQ92854 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA4DQ92854 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.17■□□□□ 0.82
SEMA4DQ92854 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA4DQ92854 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.17■□□□□ 0.82
SEMA4DQ92854 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.17■□□□□ 0.82
SEMA4DQ92854 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.17■□□□□ 0.82
SEMA4DQ92854 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA4DQ92854 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA4DQ92854 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.17■□□□□ 0.82
SEMA4DQ92854 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA4DQ92854 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
SEMA4DQ92854 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SEMA4DQ92854 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.17■□□□□ 0.82
SEMA4DQ92854 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.17■□□□□ 0.82
SEMA4DQ92854 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.17■□□□□ 0.82
SEMA4DQ92854 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.17■□□□□ 0.82
SEMA4DQ92854 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.17■□□□□ 0.82
SEMA4DQ92854 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.17■□□□□ 0.82
SEMA4DQ92854 NAPSB-206ENST00000562112 1266 ntBASIC20.17■□□□□ 0.82
SEMA4DQ92854 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SEMA4DQ92854 AC116562.4-202ENST00000641738 218 ntBASIC20.17■□□□□ 0.82
SEMA4DQ92854 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA4DQ92854 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.17■□□□□ 0.82
SEMA4DQ92854 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
SEMA4DQ92854 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA4DQ92854 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA4DQ92854 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.17■□□□□ 0.82
SEMA4DQ92854 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.17■□□□□ 0.82
SEMA4DQ92854 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA4DQ92854 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.17■□□□□ 0.82
SEMA4DQ92854 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SEMA4DQ92854 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
SEMA4DQ92854 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA4DQ92854 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
SEMA4DQ92854 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA4DQ92854 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA4DQ92854 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA4DQ92854 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA4DQ92854 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.16■□□□□ 0.82
SEMA4DQ92854 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA4DQ92854 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA4DQ92854 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA4DQ92854 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA4DQ92854 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA4DQ92854 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.16■□□□□ 0.82
SEMA4DQ92854 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.16■□□□□ 0.82
SEMA4DQ92854 CCR12P-201ENST00000446203 998 ntBASIC20.16■□□□□ 0.82
SEMA4DQ92854 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
SEMA4DQ92854 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.16■□□□□ 0.82
SEMA4DQ92854 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
SEMA4DQ92854 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA4DQ92854 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA4DQ92854 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA4DQ92854 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SEMA4DQ92854 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SEMA4DQ92854 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA4DQ92854 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA4DQ92854 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA4DQ92854 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA4DQ92854 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA4DQ92854 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.16■□□□□ 0.82
SEMA4DQ92854 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms