Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 SPDYE13P-201ENST00000445314 798 ntBASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 AC092597.1-201ENST00000487352 616 ntBASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 AC005332.7-201ENST00000614046 2005 ntBASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 HBZP1-201ENST00000354915 429 ntBASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 KRT18P56-201ENST00000507275 550 ntBASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 AL512353.2-201ENST00000448759 1962 ntBASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 RCC2P3-201ENST00000418112 1537 ntBASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.46■□□□□ 0.71
SH3RF2Q8TEC5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 AC069148.1-201ENST00000608741 768 ntBASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 FEM1AP3-201ENST00000403722 1741 ntBASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
SH3RF2Q8TEC5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 SEC1P-202ENST00000473944 940 ntBASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 AC112497.1-201ENST00000624824 639 ntBASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms