Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 AC006970.2-201ENST00000450065 779 ntBASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 AC105036.2-201ENST00000569468 176 ntBASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 OR10C1-204ENST00000622521 1039 ntBASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 AL499627.1-201ENST00000569373 2188 ntBASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 AC106820.2-201ENST00000563775 3264 ntBASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD2Q8NHY2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 AC135776.1-201ENST00000319817 2481 ntBASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 CROCCP5-201ENST00000436658 830 ntBASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 AL050303.2-201ENST00000619798 666 ntBASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD2Q8NHY2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
RFWD2Q8NHY2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD2Q8NHY2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD2Q8NHY2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD2Q8NHY2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD2Q8NHY2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD2Q8NHY2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD2Q8NHY2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD2Q8NHY2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RFWD2Q8NHY2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RFWD2Q8NHY2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD2Q8NHY2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RFWD2Q8NHY2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RFWD2Q8NHY2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD2Q8NHY2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD2Q8NHY2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.54■□□□□ 0.56
RFWD2Q8NHY2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.54■□□□□ 0.56
RFWD2Q8NHY2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.54■□□□□ 0.56
RFWD2Q8NHY2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.54■□□□□ 0.56
RFWD2Q8NHY2 AF201337.1-201ENST00000520239 748 ntBASIC18.54■□□□□ 0.56
RFWD2Q8NHY2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms