Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.25■□□□□ 0.67
RTL3Q8N8U3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.25■□□□□ 0.67
RTL3Q8N8U3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.25■□□□□ 0.67
RTL3Q8N8U3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.25■□□□□ 0.67
RTL3Q8N8U3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
RTL3Q8N8U3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL3Q8N8U3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL3Q8N8U3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
RTL3Q8N8U3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.25■□□□□ 0.67
RTL3Q8N8U3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.25■□□□□ 0.67
RTL3Q8N8U3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL3Q8N8U3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL3Q8N8U3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 AL031598.1-201ENST00000561511 1773 ntBASIC19.24■□□□□ 0.67
RTL3Q8N8U3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 ECEL1P3-201ENST00000427961 737 ntBASIC19.24■□□□□ 0.67
RTL3Q8N8U3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.24■□□□□ 0.67
RTL3Q8N8U3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.24■□□□□ 0.67
RTL3Q8N8U3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RTL3Q8N8U3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTL3Q8N8U3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.23■□□□□ 0.67
RTL3Q8N8U3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.23■□□□□ 0.67
RTL3Q8N8U3 AL357033.4-201ENST00000617703 1807 ntBASIC19.23■□□□□ 0.67
RTL3Q8N8U3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTL3Q8N8U3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTL3Q8N8U3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
RTL3Q8N8U3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTL3Q8N8U3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTL3Q8N8U3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.23■□□□□ 0.67
RTL3Q8N8U3 MIR564-202ENST00000385049 94 ntBASIC19.23■□□□□ 0.67
RTL3Q8N8U3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTL3Q8N8U3 AL512604.3-201ENST00000569583 964 ntBASIC19.23■□□□□ 0.67
RTL3Q8N8U3 AC005363.2-201ENST00000618631 242 ntBASIC19.23■□□□□ 0.67
RTL3Q8N8U3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTL3Q8N8U3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTL3Q8N8U3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
RTL3Q8N8U3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTL3Q8N8U3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RTL3Q8N8U3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTL3Q8N8U3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RTL3Q8N8U3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.22■□□□□ 0.67
RTL3Q8N8U3 Z98044.1-201ENST00000632503 1764 ntBASIC19.22■□□□□ 0.67
RTL3Q8N8U3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.22■□□□□ 0.67
RTL3Q8N8U3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL3Q8N8U3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.22■□□□□ 0.67
RTL3Q8N8U3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RTL3Q8N8U3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL3Q8N8U3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.22■□□□□ 0.67
RTL3Q8N8U3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL3Q8N8U3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RTL3Q8N8U3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
RTL3Q8N8U3 AC113347.1-201ENST00000413321 391 ntBASIC19.22■□□□□ 0.67
RTL3Q8N8U3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.22■□□□□ 0.67
RTL3Q8N8U3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.22■□□□□ 0.67
RTL3Q8N8U3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.22■□□□□ 0.67
RTL3Q8N8U3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL3Q8N8U3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.22■□□□□ 0.67
RTL3Q8N8U3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
RTL3Q8N8U3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTL3Q8N8U3 AC093503.3-201ENST00000624917 2352 ntBASIC19.21■□□□□ 0.67
RTL3Q8N8U3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL3Q8N8U3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms