Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 HEIH-201ENST00000623091 1652 ntBASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN22Q8N7P3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 KRASP1-201ENST00000407852 552 ntBASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN22Q8N7P3 ABALON-201ENST00000629058 1903 ntBASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 AC004264.1-201ENST00000608354 794 ntBASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 KRT8P41-201ENST00000533985 1514 ntBASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
CLDN22Q8N7P3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 AC239809.2-201ENST00000415381 517 ntBASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN22Q8N7P3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms