Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 AC116562.4-201ENST00000641316 2276 ntBASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 KRT18P38-201ENST00000449496 1282 ntBASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 AC024243.1-201ENST00000609234 778 ntBASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 AC008556.1-201ENST00000610908 2040 ntBASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCN4BQ8IWT1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCN4BQ8IWT1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 AL031133.1-201ENST00000406807 723 ntBASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 MYC-208ENST00000641036 567 ntBASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN4BQ8IWT1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 AL109659.2-201ENST00000606809 1674 ntBASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 AC005332.7-201ENST00000614046 2005 ntBASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCN4BQ8IWT1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms