Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 NUDT16P1-203ENST00000513809 620 ntBASIC17.62■□□□□ 0.41
CCDC71Q8IV32 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 RN7SL850P-201ENST00000579959 291 ntBASIC17.62■□□□□ 0.41
CCDC71Q8IV32 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 AP000525.1-201ENST00000608286 694 ntBASIC17.62■□□□□ 0.41
CCDC71Q8IV32 MIR6786-201ENST00000616843 113 ntBASIC17.62■□□□□ 0.41
CCDC71Q8IV32 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 KRT8P9-201ENST00000558927 1449 ntBASIC17.62■□□□□ 0.41
CCDC71Q8IV32 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 REXO1L10P-201ENST00000615707 1290 ntBASIC17.61■□□□□ 0.41
CCDC71Q8IV32 CR392000.1-201ENST00000624770 1228 ntBASIC17.61■□□□□ 0.41
CCDC71Q8IV32 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC71Q8IV32 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 MIR1238-201ENST00000408483 83 ntBASIC17.6■□□□□ 0.41
CCDC71Q8IV32 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC71Q8IV32 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 AC116351.2-201ENST00000606540 1585 ntBASIC17.59■□□□□ 0.41
CCDC71Q8IV32 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 UNC93B2-201ENST00000285383 730 ntBASIC17.59■□□□□ 0.41
CCDC71Q8IV32 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms