Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHFQ7M4L6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHFQ7M4L6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHFQ7M4L6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHFQ7M4L6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHFQ7M4L6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHFQ7M4L6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHFQ7M4L6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHFQ7M4L6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHFQ7M4L6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHFQ7M4L6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHFQ7M4L6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHFQ7M4L6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHFQ7M4L6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHFQ7M4L6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHFQ7M4L6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.98■□□□□ 0.31
SHFQ7M4L6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.98■□□□□ 0.31
SHFQ7M4L6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SHFQ7M4L6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
SHFQ7M4L6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SHFQ7M4L6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHFQ7M4L6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SHFQ7M4L6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHFQ7M4L6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHFQ7M4L6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.98■□□□□ 0.31
SHFQ7M4L6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.98■□□□□ 0.31
SHFQ7M4L6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.98■□□□□ 0.31
SHFQ7M4L6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHFQ7M4L6 AL109923.1-201ENST00000618799 583 ntBASIC16.98■□□□□ 0.31
SHFQ7M4L6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
SHFQ7M4L6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SHFQ7M4L6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHFQ7M4L6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHFQ7M4L6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
SHFQ7M4L6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.98■□□□□ 0.31
SHFQ7M4L6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.97■□□□□ 0.31
SHFQ7M4L6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.97■□□□□ 0.31
SHFQ7M4L6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHFQ7M4L6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHFQ7M4L6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.97■□□□□ 0.31
SHFQ7M4L6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHFQ7M4L6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHFQ7M4L6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHFQ7M4L6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHFQ7M4L6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.97■□□□□ 0.31
SHFQ7M4L6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHFQ7M4L6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHFQ7M4L6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHFQ7M4L6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.97■□□□□ 0.31
SHFQ7M4L6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHFQ7M4L6 AC069152.1-201ENST00000438030 544 ntBASIC16.97■□□□□ 0.31
SHFQ7M4L6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.97■□□□□ 0.31
SHFQ7M4L6 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.97■□□□□ 0.31
SHFQ7M4L6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SHFQ7M4L6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SHFQ7M4L6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHFQ7M4L6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHFQ7M4L6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SHFQ7M4L6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHFQ7M4L6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHFQ7M4L6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.97■□□□□ 0.31
SHFQ7M4L6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SHFQ7M4L6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHFQ7M4L6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms