Protein–RNA interactions for Protein: Q6NXP0

EFCAB12, EF-hand calcium-binding domain-containing protein 12, humanhuman

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB12Q6NXP0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.66■□□□□ 0.9
EFCAB12Q6NXP0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFCAB12Q6NXP0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFCAB12Q6NXP0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.66■□□□□ 0.9
EFCAB12Q6NXP0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
EFCAB12Q6NXP0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFCAB12Q6NXP0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.66■□□□□ 0.9
EFCAB12Q6NXP0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EFCAB12Q6NXP0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EFCAB12Q6NXP0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
EFCAB12Q6NXP0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 SPDYE13P-201ENST00000445314 798 ntBASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 AL157888.1-201ENST00000631930 593 ntBASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 AC005332.7-201ENST00000614046 2005 ntBASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.65■□□□□ 0.9
EFCAB12Q6NXP0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
EFCAB12Q6NXP0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.64■□□□□ 0.9
EFCAB12Q6NXP0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
EFCAB12Q6NXP0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 KRT8P7-201ENST00000533003 1432 ntBASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 HOXB1-202ENST00000577092 1414 ntBASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.64■□□□□ 0.89
EFCAB12Q6NXP0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 AC104390.1-201ENST00000555663 520 ntBASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 MIR3917-201ENST00000580971 93 ntBASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 AL161938.1-201ENST00000569833 2180 ntBASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EFCAB12Q6NXP0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EFCAB12Q6NXP0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.62■□□□□ 0.89
EFCAB12Q6NXP0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EFCAB12Q6NXP0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EFCAB12Q6NXP0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.62■□□□□ 0.89
EFCAB12Q6NXP0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EFCAB12Q6NXP0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EFCAB12Q6NXP0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.62■□□□□ 0.89
EFCAB12Q6NXP0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EFCAB12Q6NXP0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EFCAB12Q6NXP0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms