Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.98■□□□□ 0.31
RPS4XP62701 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4XP62701 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4XP62701 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RPS4XP62701 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4XP62701 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4XP62701 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
RPS4XP62701 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RPS4XP62701 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.98■□□□□ 0.31
RPS4XP62701 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4XP62701 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.98■□□□□ 0.31
RPS4XP62701 KRT8P32-201ENST00000512863 1461 ntBASIC16.98■□□□□ 0.31
RPS4XP62701 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4XP62701 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RPS4XP62701 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4XP62701 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.97■□□□□ 0.31
RPS4XP62701 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RPS4XP62701 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RPS4XP62701 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.97■□□□□ 0.31
RPS4XP62701 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RPS4XP62701 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 AC004951.3-201ENST00000418645 1148 ntBASIC16.97■□□□□ 0.31
RPS4XP62701 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.97■□□□□ 0.31
RPS4XP62701 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 AC012306.2-201ENST00000609350 630 ntBASIC16.97■□□□□ 0.31
RPS4XP62701 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.97■□□□□ 0.31
RPS4XP62701 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 AC073592.3-201ENST00000625118 1834 ntBASIC16.97■□□□□ 0.31
RPS4XP62701 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.97■□□□□ 0.31
RPS4XP62701 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 AC079598.2-202ENST00000546624 1451 ntBASIC16.97■□□□□ 0.31
RPS4XP62701 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.97■□□□□ 0.31
RPS4XP62701 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.97■□□□□ 0.31
RPS4XP62701 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.97■□□□□ 0.31
RPS4XP62701 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 BICD1-207ENST00000551848 1962 ntBASIC16.97■□□□□ 0.31
RPS4XP62701 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4XP62701 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.96■□□□□ 0.31
RPS4XP62701 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPS4XP62701 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.96■□□□□ 0.31
RPS4XP62701 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RPS4XP62701 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.96■□□□□ 0.31
RPS4XP62701 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.96■□□□□ 0.31
RPS4XP62701 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.96■□□□□ 0.31
RPS4XP62701 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.96■□□□□ 0.31
RPS4XP62701 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPS4XP62701 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RPS4XP62701 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPS4XP62701 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.96■□□□□ 0.31
RPS4XP62701 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
RPS4XP62701 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.96■□□□□ 0.31
RPS4XP62701 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPS4XP62701 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.96■□□□□ 0.31
RPS4XP62701 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.96■□□□□ 0.31
RPS4XP62701 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.96■□□□□ 0.31
RPS4XP62701 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RPS4XP62701 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.96■□□□□ 0.31
RPS4XP62701 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.96■□□□□ 0.31
RPS4XP62701 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPS4XP62701 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPS4XP62701 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPS4XP62701 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPS4XP62701 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.96■□□□□ 0.31
RPS4XP62701 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.3
RPS4XP62701 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RPS4XP62701 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
RPS4XP62701 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.96■□□□□ 0.3
RPS4XP62701 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.96■□□□□ 0.3
RPS4XP62701 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RPS4XP62701 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4XP62701 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RPS4XP62701 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4XP62701 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.95■□□□□ 0.3
RPS4XP62701 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.95■□□□□ 0.3
RPS4XP62701 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.95■□□□□ 0.3
RPS4XP62701 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4XP62701 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4XP62701 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.95■□□□□ 0.3
RPS4XP62701 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4XP62701 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4XP62701 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4XP62701 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.95■□□□□ 0.3
RPS4XP62701 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4XP62701 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4XP62701 NUDT16P1-203ENST00000513809 620 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms